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biocommons / uta

Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; available as a docker image
Apache License 2.0
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Invitae local changes #229

Closed safay closed 3 years ago

safay commented 3 years ago
  1. Fix issue in update-ncbi where NCBI endpoint was returning fewer records than requested because of a bulk request limit of 250. Improve error handling so that if this issue emerges again, the script does not fail silently.
  2. Improve undesired behavior in ncbi-parse-gff where HGNC names were dropped by the build process.
reece commented 3 years ago

Do you understand why ba1d34cc383ccd7f5810ef192a05c019234ad75f and c9cb6049f4a87dbe3261f4bc3a8d887b9a61135a appear as commits from me?

reece commented 3 years ago

Never mind... I see that these are the same commits that we talked about previously. For some reason I though that these were fixed.

I'm going to rebase and reattribute to you. Hang tight.

reece commented 3 years ago

Superseded by #230.