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biocommons / uta

Universal Transcript Archive: comprehensive genome-transcript alignments; multiple transcript sources, versions, and alignment methods; available as a docker image
Apache License 2.0
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Workflow for adding updated refseq alignment data #236

Closed soensz01 closed 6 months ago

soensz01 commented 2 years ago

I believe there have been similar questions and I'm uncertain if there was a clear recommendation about how one would go about adding new transcript data into uta for use with the hgvs module such as the data from here: https://ftp.ncbi.nlm.nih.gov/genomes/all/annotation_releases/9606/105.20201022/

Will proper functionality require that changes to the transcript sequences as well as the alignment data be available within the seqrepo data as well?

Thanks for any advice

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This issue was closed because it has been stalled for 7 days with no activity.

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This issue is stale because it has been open 90 days with no activity. Remove stale label or comment or this will be closed in 7 days.

github-actions[bot] commented 6 months ago

This issue was closed because it has been stalled for 7 days with no activity.