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biocompute-objects / portal_userdb

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GDC Data Processing #358

Open ChinweokeO opened 1 month ago

ChinweokeO commented 1 month ago

https://gdc.cancer.gov/about-data/gdc-data-processing

ChinweokeO commented 4 weeks ago

https://docs.gdc.cancer.gov/Data/Bioinformatics_Pipelines/Expression_mRNA_Pipeline/

There are different pipelines listed here:

DNA Seq Analysis
mRNA Analysis
miRNA Analysis
Copy Number Variation Analysis
Methylation Analysis Pipeline

We are working on DNA Seq Analysis and mRNA Seq. If there is not enough info please feel free to choose another workflow.

Please see repo below for overview: https://github.com/NCI-GDC/gdc-workflow-overview