GDC Data Processing - Githubissues

biocompute-objects / portal_userdb

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GDC Data Processing #358

Open ChinweokeO opened 6 months ago

ChinweokeO commented 6 months ago

https://gdc.cancer.gov/about-data/gdc-data-processing

ChinweokeO commented 6 months ago

https://docs.gdc.cancer.gov/Data/Bioinformatics_Pipelines/Expression_mRNA_Pipeline/

There are different pipelines listed here:

DNA Seq Analysis
mRNA Analysis
miRNA Analysis
Copy Number Variation Analysis
Methylation Analysis Pipeline

We are working on DNA Seq Analysis and mRNA Seq. If there is not enough info please feel free to choose another workflow.

Please see repo below for overview: https://github.com/NCI-GDC/gdc-workflow-overview