Packages breaking the nightly upload job

[dpryan79]

The following recipes have meta.yaml files that are breaking the nightly upload job. The order for sections in a meta.yaml should be package, source, build, requirements, test, about, extras. Usually these start with about.

• [x] recipes/2pg_cartesian
• [x] recipes/weblogo/2.8.2
• [x] recipes/trimmomatic/0.32
• [x] recipes/trimmomatic/0.33
• [x] recipes/trimmomatic/0.35
• [x] recipes/tophat2
• [x] recipes/tophat2/2.0.13
• [x] recipes/rnashapes/2.1.6
• [x] recipes/rnashapes/3.3.0
• [x] recipes/trinotate
• [x] recipes/metavelvet-annois
• [x] recipes/meme/4.11.1
• [x] recipes/meme/4.11.2
• [x] recipes/mafft/7.305
• [x] recipes/mafft/7.310
• [x] recipes/samtools/0.1.19
• [x] recipes/samtools/1.1
• [x] recipes/last/490
• [x] recipes/last/638
• [x] recipes/last/874
• [x] recipes/kat/2.0.8
• [x] recipes/kat/2.3.1
• [x] recipes/gromacs
• [x] recipes/braker
• [x] recipes/bowtie2/2.2.1
• [x] recipes/bowtie2/2.2.4
• [x] recipes/bowtie2/2.2.5
• [x] recipes/bedtools/2.19.1
• [x] recipes/bedtools/2.20.1
• [x] recipes/bedtools/2.22
• [x] recipes/bedtools/2.23.0
• [x] recipes/bcftools
• [x] recipes/bcftools/1.3.1
• [x] recipes/sqt
• [x] recipes/tepid
• [x] recipes/aragorn/1.2.38
• [x] recipes/art/3.11.14
• [x] recipes/autodock-vina
• [x] recipes/bcbiogff/0.6.2
• [x] recipes/bcbiogff
• [x] recipes/biopet/0.8.0
• [x] recipes/biopet
• [x] recipes/blockbuster
• [x] recipes/metfrag
• [x] recipes/metfrag/2.3.1
• [x] recipes/metfrag/2.4.2
• [x] recipes/varscan/2.4.2
• [x] recipes/discovar
• [x] recipes/ccat/3.0
• [x] recipes/transabyss
• [x] recipes/opsin/1.4.0
• [x] recipes/opsin/2.1.0
• [x] recipes/opsin/2.4.0
• [x] recipes/cluster-picker
• [x] recipes/soapdenovo2-prepare
• [x] recipes/damidseq_pipeline
• [x] recipes/repeatmodeler
• [x] recipes/detonate

[dpryan79]

I have these blacklisted in bulk (where I'm doing the bioconductor 3.9 release) at the moment, but we should really fix these in master.

[dpryan79]

I'm working on these in the bulk branch now.