Closed mictadlo closed 2 years ago
Did you try to install it in a fresh environment?
conda create -n agat conda activate agat conda --install -c bioconda agat
Hi, Unfortunately, I still get same problem:
> conda create -n agat
> conda activate agat
(agat)> conda install -c bioconda agat
The following packages will be downloaded:
package | build
---------------------------|-----------------
agat-0.1.0 | pl526r35_0 215 KB bioconda
binutils_linux-64-2.33.1 | h9595d00_16 21 KB conda-forge
gcc_linux-64-7.3.0 | h553295d_16 22 KB conda-forge
gfortran_impl_linux-64-7.3.0| hdf63c60_3 9.3 MB conda-forge
gfortran_linux-64-7.3.0 | h553295d_16 21 KB conda-forge
giflib-5.2.1 | h516909a_1 73 KB conda-forge
gxx_linux-64-7.3.0 | h553295d_16 21 KB conda-forge
ld_impl_linux-64-2.33.1 | h53a641e_7 653 KB conda-forge
libgfortran-ng-7.3.0 | hdf63c60_3 1.7 MB conda-forge
libtiff-4.1.0 | hc3755c2_3 568 KB conda-forge
libwebp-1.0.2 | h56121f0_5 938 KB conda-forge
python-3.7.6 | h357f687_2 52.9 MB conda-forge
r-base-3.5.1 | hc461eb7_1012 30.4 MB conda-forge
setuptools-44.0.0 | py37_0 659 KB conda-forge
xorg-libxpm-3.5.13 | h516909a_0 63 KB conda-forge
------------------------------------------------------------
Total: 97.5 MB
The following NEW packages will be INSTALLED:
_libgcc_mutex conda-forge/linux-64::_libgcc_mutex-0.1-conda_forge
_r-mutex conda-forge/noarch::_r-mutex-1.0.1-anacondar_1
agat bioconda/noarch::agat-0.1.0-pl526r35_0
binutils_impl_lin~ conda-forge/linux-64::binutils_impl_linux-64-2.33.1-he1b5a44_7
binutils_linux-64 conda-forge/linux-64::binutils_linux-64-2.33.1-h9595d00_16
bwidget conda-forge/linux-64::bwidget-1.9.14-0
bzip2 conda-forge/linux-64::bzip2-1.0.8-h516909a_2
ca-certificates conda-forge/linux-64::ca-certificates-2019.11.28-hecc5488_0
cairo conda-forge/linux-64::cairo-1.16.0-hfb77d84_1002
certifi conda-forge/linux-64::certifi-2019.11.28-py37_0
clustalw bioconda/linux-64::clustalw-2.1-hc9558a2_5
curl conda-forge/linux-64::curl-7.65.3-hf8cf82a_0
expat conda-forge/linux-64::expat-2.2.5-he1b5a44_1004
fontconfig conda-forge/linux-64::fontconfig-2.13.1-h86ecdb6_1001
freetype conda-forge/linux-64::freetype-2.10.0-he983fc9_1
fribidi conda-forge/linux-64::fribidi-1.0.5-h516909a_1002
gcc_impl_linux-64 conda-forge/linux-64::gcc_impl_linux-64-7.3.0-habb00fd_2
gcc_linux-64 conda-forge/linux-64::gcc_linux-64-7.3.0-h553295d_16
gettext conda-forge/linux-64::gettext-0.19.8.1-hc5be6a0_1002
gfortran_impl_lin~ conda-forge/linux-64::gfortran_impl_linux-64-7.3.0-hdf63c60_3
gfortran_linux-64 conda-forge/linux-64::gfortran_linux-64-7.3.0-h553295d_16
giflib conda-forge/linux-64::giflib-5.2.1-h516909a_1
glib conda-forge/linux-64::glib-2.58.3-py37h6f030ca_1002
graphite2 conda-forge/linux-64::graphite2-1.3.13-hf484d3e_1000
graphviz conda-forge/linux-64::graphviz-2.42.3-h0511662_0
gsl conda-forge/linux-64::gsl-2.5-h294904e_1
gxx_impl_linux-64 conda-forge/linux-64::gxx_impl_linux-64-7.3.0-hdf63c60_2
gxx_linux-64 conda-forge/linux-64::gxx_linux-64-7.3.0-h553295d_16
harfbuzz conda-forge/linux-64::harfbuzz-2.4.0-h9f30f68_3
icu conda-forge/linux-64::icu-64.2-he1b5a44_1
jpeg conda-forge/linux-64::jpeg-9c-h14c3975_1001
krb5 conda-forge/linux-64::krb5-1.16.4-h2fd8d38_0
ld_impl_linux-64 conda-forge/linux-64::ld_impl_linux-64-2.33.1-h53a641e_7
libblas conda-forge/linux-64::libblas-3.8.0-14_openblas
libcblas conda-forge/linux-64::libcblas-3.8.0-14_openblas
libcurl conda-forge/linux-64::libcurl-7.65.3-hda55be3_0
libdb bioconda/linux-64::libdb-6.1.26-0
libedit conda-forge/linux-64::libedit-3.1.20170329-hf8c457e_1001
libffi conda-forge/linux-64::libffi-3.2.1-he1b5a44_1006
libgcc conda-forge/linux-64::libgcc-7.2.0-h69d50b8_2
libgcc-ng conda-forge/linux-64::libgcc-ng-9.2.0-h24d8f2e_1
libgd conda-forge/linux-64::libgd-2.2.5-h307a58e_1007
libgfortran-ng conda-forge/linux-64::libgfortran-ng-7.3.0-hdf63c60_3
libgomp conda-forge/linux-64::libgomp-9.2.0-h24d8f2e_1
libiconv conda-forge/linux-64::libiconv-1.15-h516909a_1005
libopenblas conda-forge/linux-64::libopenblas-0.3.7-h5ec1e0e_6
libpng conda-forge/linux-64::libpng-1.6.37-hed695b0_0
libssh2 conda-forge/linux-64::libssh2-1.8.2-h22169c7_2
libstdcxx-ng conda-forge/linux-64::libstdcxx-ng-9.2.0-hdf63c60_1
libtiff conda-forge/linux-64::libtiff-4.1.0-hc3755c2_3
libtool conda-forge/linux-64::libtool-2.4.6-h14c3975_1002
libuuid conda-forge/linux-64::libuuid-2.32.1-h14c3975_1000
libwebp conda-forge/linux-64::libwebp-1.0.2-h56121f0_5
libxcb conda-forge/linux-64::libxcb-1.13-h14c3975_1002
libxml2 conda-forge/linux-64::libxml2-2.9.10-hee79883_0
libxslt conda-forge/linux-64::libxslt-1.1.33-h31b3aaa_0
lz4-c conda-forge/linux-64::lz4-c-1.8.3-he1b5a44_1001
make conda-forge/linux-64::make-4.2.1-h14c3975_2004
ncurses conda-forge/linux-64::ncurses-6.1-hf484d3e_1002
openmp_impl conda-forge/linux-64::openmp_impl-4.5-0_gnu
openssl conda-forge/linux-64::openssl-1.1.1d-h516909a_0
paml bioconda/linux-64::paml-4.9-h516909a_5
pango conda-forge/linux-64::pango-1.42.4-ha030887_1
pcre conda-forge/linux-64::pcre-8.43-he1b5a44_0
perl conda-forge/linux-64::perl-5.26.2-h516909a_1006
perl-aceperl bioconda/linux-64::perl-aceperl-1.92-pl526_2
perl-algorithm-di~ bioconda/linux-64::perl-algorithm-diff-1.1903-pl526_2
perl-algorithm-mu~ bioconda/linux-64::perl-algorithm-munkres-0.08-pl526_1
perl-apache-test bioconda/linux-64::perl-apache-test-1.40-pl526_1
perl-app-cpanminus bioconda/linux-64::perl-app-cpanminus-1.7044-pl526_1
perl-appconfig bioconda/linux-64::perl-appconfig-1.71-pl526_1
perl-array-compare bioconda/linux-64::perl-array-compare-3.0.1-pl526_1
perl-autoloader bioconda/linux-64::perl-autoloader-5.74-pl526_2
perl-base bioconda/linux-64::perl-base-2.23-pl526_1
perl-bio-asn1-ent~ bioconda/noarch::perl-bio-asn1-entrezgene-1.73-pl526_1
perl-bio-coordina~ bioconda/noarch::perl-bio-coordinate-1.007001-pl526_1
perl-bio-featureio bioconda/noarch::perl-bio-featureio-1.6.905-pl526_2
perl-bio-phylo bioconda/noarch::perl-bio-phylo-0.58-pl526_2
perl-bio-samtools bioconda/linux-64::perl-bio-samtools-1.43-pl526h1341992_1
perl-bio-tools-ph~ bioconda/noarch::perl-bio-tools-phylo-paml-1.7.3-pl526_1
perl-bio-tools-ru~ bioconda/noarch::perl-bio-tools-run-alignment-clustalw-1.7.4-pl526_1
perl-bio-tools-ru~ bioconda/noarch::perl-bio-tools-run-alignment-tcoffee-1.7.4-pl526_2
perl-bioperl bioconda/noarch::perl-bioperl-1.7.2-pl526_11
perl-bioperl-core bioconda/noarch::perl-bioperl-core-1.007002-pl526_2
perl-bioperl-run bioconda/noarch::perl-bioperl-run-1.007002-pl526_4
perl-business-isbn bioconda/linux-64::perl-business-isbn-3.004-pl526_0
perl-business-isb~ bioconda/linux-64::perl-business-isbn-data-20140910.003-pl526_0
perl-cache-cache bioconda/linux-64::perl-cache-cache-1.08-pl526_0
perl-capture-tiny bioconda/linux-64::perl-capture-tiny-0.48-pl526_0
perl-carp bioconda/linux-64::perl-carp-1.38-pl526_3
perl-cgi bioconda/linux-64::perl-cgi-4.44-pl526h14c3975_1
perl-class-data-i~ bioconda/linux-64::perl-class-data-inheritable-0.08-pl526_1
perl-class-inspec~ bioconda/linux-64::perl-class-inspector-1.34-pl526_0
perl-class-load bioconda/linux-64::perl-class-load-0.25-pl526_0
perl-class-load-xs bioconda/linux-64::perl-class-load-xs-0.10-pl526h6bb024c_2
perl-class-method~ bioconda/linux-64::perl-class-method-modifiers-2.12-pl526_0
perl-clone bioconda/linux-64::perl-clone-0.42-pl526h516909a_0
perl-common-sense bioconda/linux-64::perl-common-sense-3.74-pl526_2
perl-compress-raw~ bioconda/linux-64::perl-compress-raw-zlib-2.087-pl526hc9558a2_0
perl-constant bioconda/linux-64::perl-constant-1.33-pl526_1
perl-convert-bina~ bioconda/linux-64::perl-convert-binary-c-0.78-pl526h6bb024c_3
perl-convert-binh~ bioconda/linux-64::perl-convert-binhex-1.125-pl526_1
perl-crypt-rc4 bioconda/linux-64::perl-crypt-rc4-2.02-pl526_1
perl-data-dumper bioconda/linux-64::perl-data-dumper-2.173-pl526_0
perl-data-optlist bioconda/linux-64::perl-data-optlist-0.110-pl526_2
perl-data-stag bioconda/linux-64::perl-data-stag-0.14-pl526_1
perl-date-format bioconda/linux-64::perl-date-format-2.30-pl526_2
perl-db-file bioconda/linux-64::perl-db-file-1.852-pl526h14c3975_0
perl-dbd-sqlite bioconda/linux-64::perl-dbd-sqlite-1.64-pl526h516909a_0
perl-dbi bioconda/linux-64::perl-dbi-1.642-pl526_0
perl-devel-global~ bioconda/linux-64::perl-devel-globaldestruction-0.14-pl526_0
perl-devel-overlo~ bioconda/linux-64::perl-devel-overloadinfo-0.005-pl526_0
perl-devel-stackt~ bioconda/noarch::perl-devel-stacktrace-2.04-pl526_0
perl-digest-hmac bioconda/linux-64::perl-digest-hmac-1.03-pl526_3
perl-digest-md5 bioconda/linux-64::perl-digest-md5-2.55-pl526_0
perl-digest-perl-~ bioconda/linux-64::perl-digest-perl-md5-1.9-pl526_1
perl-digest-sha1 bioconda/linux-64::perl-digest-sha1-2.13-pl526h6bb024c_1
perl-dist-checkco~ bioconda/linux-64::perl-dist-checkconflicts-0.11-pl526_2
perl-dynaloader bioconda/linux-64::perl-dynaloader-1.25-pl526_1
perl-email-date-f~ bioconda/linux-64::perl-email-date-format-1.005-pl526_2
perl-encode bioconda/linux-64::perl-encode-2.88-pl526_1
perl-encode-locale bioconda/linux-64::perl-encode-locale-1.05-pl526_6
perl-error bioconda/linux-64::perl-error-0.17027-pl526_1
perl-eval-closure bioconda/linux-64::perl-eval-closure-0.14-pl526h6bb024c_4
perl-exception-cl~ bioconda/linux-64::perl-exception-class-1.44-pl526_0
perl-exporter bioconda/linux-64::perl-exporter-5.72-pl526_1
perl-exporter-tiny bioconda/linux-64::perl-exporter-tiny-1.002001-pl526_0
perl-extutils-mak~ bioconda/linux-64::perl-extutils-makemaker-7.36-pl526_1
perl-file-listing bioconda/linux-64::perl-file-listing-6.04-pl526_1
perl-file-path bioconda/linux-64::perl-file-path-2.16-pl526_0
perl-file-share bioconda/linux-64::perl-file-share-0.25-pl526_2
perl-file-sharedir bioconda/linux-64::perl-file-sharedir-1.116-pl526_1
perl-file-sharedi~ bioconda/linux-64::perl-file-sharedir-install-0.13-pl526_0
perl-file-slurp-t~ bioconda/linux-64::perl-file-slurp-tiny-0.004-pl526_1
perl-file-sort bioconda/linux-64::perl-file-sort-1.01-pl526_2
perl-file-temp bioconda/linux-64::perl-file-temp-0.2304-pl526_2
perl-file-which bioconda/linux-64::perl-file-which-1.23-pl526_0
perl-font-afm bioconda/linux-64::perl-font-afm-1.20-pl526_2
perl-font-ttf bioconda/linux-64::perl-font-ttf-1.06-pl526_0
perl-gd bioconda/linux-64::perl-gd-2.71-pl526he860b03_0
perl-getopt-long bioconda/linux-64::perl-getopt-long-2.50-pl526_1
perl-graph bioconda/linux-64::perl-graph-0.9704-pl526_1
perl-graphviz bioconda/linux-64::perl-graphviz-2.24-pl526h734ff71_0
perl-html-element~ bioconda/linux-64::perl-html-element-extended-1.18-pl526_1
perl-html-entitie~ bioconda/linux-64::perl-html-entities-numbered-0.04-pl526_1
perl-html-formatt~ bioconda/linux-64::perl-html-formatter-2.16-pl526_0
perl-html-parser bioconda/linux-64::perl-html-parser-3.72-pl526h6bb024c_5
perl-html-tableex~ bioconda/linux-64::perl-html-tableextract-2.13-pl526_2
perl-html-tagset bioconda/linux-64::perl-html-tagset-3.20-pl526_3
perl-html-tidy bioconda/linux-64::perl-html-tidy-1.60-pl526_0
perl-html-tree bioconda/linux-64::perl-html-tree-5.07-pl526_1
perl-html-treebui~ bioconda/linux-64::perl-html-treebuilder-xpath-0.14-pl526_1
perl-http-cookies bioconda/linux-64::perl-http-cookies-6.04-pl526_0
perl-http-daemon bioconda/linux-64::perl-http-daemon-6.01-pl526_1
perl-http-date bioconda/linux-64::perl-http-date-6.02-pl526_3
perl-http-message bioconda/linux-64::perl-http-message-6.18-pl526_0
perl-http-negotia~ bioconda/linux-64::perl-http-negotiate-6.01-pl526_3
perl-image-info bioconda/linux-64::perl-image-info-1.38-pl526_1
perl-image-size bioconda/linux-64::perl-image-size-3.300-pl526_2
perl-io-html bioconda/linux-64::perl-io-html-1.001-pl526_2
perl-io-sessionda~ bioconda/linux-64::perl-io-sessiondata-1.03-pl526_1
perl-io-socket-ssl bioconda/linux-64::perl-io-socket-ssl-2.066-pl526_0
perl-io-string bioconda/linux-64::perl-io-string-1.08-pl526_3
perl-io-stringy bioconda/linux-64::perl-io-stringy-2.111-pl526_1
perl-io-tty bioconda/linux-64::perl-io-tty-1.12-pl526_1
perl-ipc-run bioconda/linux-64::perl-ipc-run-20180523.0-pl526_0
perl-ipc-sharelite bioconda/linux-64::perl-ipc-sharelite-0.17-pl526h6bb024c_1
perl-jcode bioconda/linux-64::perl-jcode-2.07-pl526_2
perl-json bioconda/linux-64::perl-json-4.02-pl526_0
perl-json-xs bioconda/linux-64::perl-json-xs-2.34-pl526h6bb024c_3
perl-lib bioconda/linux-64::perl-lib-0.63-pl526_1
perl-libwww-perl bioconda/noarch::perl-libwww-perl-6.39-pl526_0
perl-libxml-perl bioconda/linux-64::perl-libxml-perl-0.08-pl526_2
perl-list-moreuti~ bioconda/linux-64::perl-list-moreutils-0.428-pl526_1
perl-list-moreuti~ bioconda/linux-64::perl-list-moreutils-xs-0.428-pl526_0
perl-lwp-mediatyp~ bioconda/linux-64::perl-lwp-mediatypes-6.04-pl526_0
perl-lwp-protocol~ bioconda/linux-64::perl-lwp-protocol-https-6.07-pl526_4
perl-lwp-simple bioconda/linux-64::perl-lwp-simple-6.15-pl526h470a237_4
perl-mailtools bioconda/noarch::perl-mailtools-2.21-pl526_0
perl-math-cdf bioconda/linux-64::perl-math-cdf-0.1-pl526h14c3975_5
perl-math-derivat~ bioconda/linux-64::perl-math-derivative-1.01-pl526_0
perl-math-random bioconda/linux-64::perl-math-random-0.72-pl526h14c3975_2
perl-math-spline bioconda/linux-64::perl-math-spline-0.02-pl526_2
perl-mime-base64 bioconda/linux-64::perl-mime-base64-3.15-pl526_1
perl-mime-lite bioconda/linux-64::perl-mime-lite-3.030-pl526_1
perl-mime-tools bioconda/linux-64::perl-mime-tools-5.508-pl526_1
perl-mime-types bioconda/linux-64::perl-mime-types-2.17-pl526_0
perl-mldbm bioconda/linux-64::perl-mldbm-2.05-pl526_1
perl-module-imple~ bioconda/linux-64::perl-module-implementation-0.09-pl526_2
perl-module-runti~ bioconda/linux-64::perl-module-runtime-0.016-pl526_1
perl-module-runti~ bioconda/linux-64::perl-module-runtime-conflicts-0.003-pl526_0
perl-moo bioconda/linux-64::perl-moo-2.003004-pl526_0
perl-moose bioconda/linux-64::perl-moose-2.2011-pl526hf484d3e_1
perl-mozilla-ca bioconda/linux-64::perl-mozilla-ca-20180117-pl526_1
perl-mro-compat bioconda/linux-64::perl-mro-compat-0.13-pl526_0
perl-net-http bioconda/noarch::perl-net-http-6.19-pl526_0
perl-net-ssleay bioconda/linux-64::perl-net-ssleay-1.88-pl526h90d6eec_0
perl-ntlm bioconda/linux-64::perl-ntlm-1.09-pl526_4
perl-ole-storage_~ bioconda/linux-64::perl-ole-storage_lite-0.19-pl526_3
perl-package-depr~ bioconda/linux-64::perl-package-deprecationmanager-0.17-pl526_0
perl-package-stash bioconda/linux-64::perl-package-stash-0.38-pl526hf484d3e_1
perl-package-stas~ bioconda/linux-64::perl-package-stash-xs-0.28-pl526hf484d3e_1
perl-params-util bioconda/linux-64::perl-params-util-1.07-pl526h6bb024c_4
perl-parent bioconda/linux-64::perl-parent-0.236-pl526_1
perl-parse-recdes~ bioconda/linux-64::perl-parse-recdescent-1.967015-pl526_0
perl-pathtools bioconda/linux-64::perl-pathtools-3.75-pl526h14c3975_1
perl-pdf-api2 bioconda/noarch::perl-pdf-api2-2.035-pl526_0
perl-pod-escapes bioconda/linux-64::perl-pod-escapes-1.07-pl526_1
perl-pod-usage bioconda/linux-64::perl-pod-usage-1.69-pl526_1
perl-postscript bioconda/linux-64::perl-postscript-0.06-pl526_2
perl-regexp-common bioconda/linux-64::perl-regexp-common-2017060201-pl526_0
perl-role-tiny bioconda/noarch::perl-role-tiny-2.000008-pl526_0
perl-scalar-list-~ bioconda/linux-64::perl-scalar-list-utils-1.52-pl526h516909a_0
perl-set-scalar bioconda/linux-64::perl-set-scalar-1.29-pl526_2
perl-soap-lite bioconda/linux-64::perl-soap-lite-1.19-pl526_1
perl-socket bioconda/linux-64::perl-socket-2.027-pl526_1
perl-sort-natural~ bioconda/linux-64::perl-sort-naturally-1.03-pl526_2
perl-spreadsheet-~ bioconda/linux-64::perl-spreadsheet-parseexcel-0.65-pl526_2
perl-spreadsheet-~ bioconda/linux-64::perl-spreadsheet-writeexcel-2.40-pl526_2
perl-statistics-d~ bioconda/linux-64::perl-statistics-descriptive-3.0702-pl526_0
perl-statistics-r bioconda/linux-64::perl-statistics-r-0.34-pl526r351_3
perl-storable bioconda/linux-64::perl-storable-3.15-pl526h14c3975_0
perl-sub-exporter bioconda/linux-64::perl-sub-exporter-0.987-pl526_2
perl-sub-exporter~ bioconda/linux-64::perl-sub-exporter-progressive-0.001013-pl526_0
perl-sub-identify bioconda/linux-64::perl-sub-identify-0.14-pl526h14c3975_0
perl-sub-install bioconda/linux-64::perl-sub-install-0.928-pl526_2
perl-sub-name bioconda/linux-64::perl-sub-name-0.21-pl526_1
perl-sub-quote bioconda/linux-64::perl-sub-quote-2.006003-pl526_1
perl-sub-uplevel bioconda/linux-64::perl-sub-uplevel-0.2800-pl526h14c3975_2
perl-svg bioconda/linux-64::perl-svg-2.84-pl526_0
perl-svg-graph bioconda/linux-64::perl-svg-graph-0.02-pl526_3
perl-task-weaken bioconda/linux-64::perl-task-weaken-1.06-pl526_0
perl-template-too~ bioconda/linux-64::perl-template-toolkit-2.26-pl526_1
perl-test bioconda/linux-64::perl-test-1.26-pl526_1
perl-test-deep bioconda/linux-64::perl-test-deep-1.128-pl526_1
perl-test-differe~ bioconda/noarch::perl-test-differences-0.67-pl526_0
perl-test-excepti~ bioconda/linux-64::perl-test-exception-0.43-pl526_2
perl-test-harness bioconda/linux-64::perl-test-harness-3.42-pl526_0
perl-test-leaktra~ bioconda/linux-64::perl-test-leaktrace-0.16-pl526h14c3975_2
perl-test-most bioconda/linux-64::perl-test-most-0.35-pl526_0
perl-test-require~ bioconda/linux-64::perl-test-requiresinternet-0.05-pl526_0
perl-test-warn bioconda/linux-64::perl-test-warn-0.36-pl526_1
perl-text-balanced bioconda/linux-64::perl-text-balanced-2.03-pl526_3
perl-text-diff bioconda/linux-64::perl-text-diff-1.45-pl526_0
perl-text-wrap bioconda/linux-64::perl-text-wrap-2013.0523-pl526_1
perl-tie-ixhash bioconda/linux-64::perl-tie-ixhash-1.23-pl526_2
perl-time-hires bioconda/linux-64::perl-time-hires-1.9760-pl526h14c3975_1
perl-time-local bioconda/linux-64::perl-time-local-1.28-pl526_1
perl-timedate bioconda/linux-64::perl-timedate-2.30-pl526_1
perl-tree-dag_node bioconda/linux-64::perl-tree-dag_node-1.31-pl526_0
perl-try-tiny bioconda/linux-64::perl-try-tiny-0.30-pl526_1
perl-type-tiny bioconda/linux-64::perl-type-tiny-1.004004-pl526_0
perl-types-serial~ bioconda/linux-64::perl-types-serialiser-1.0-pl526_2
perl-unicode-map bioconda/linux-64::perl-unicode-map-0.112-pl526h6bb024c_3
perl-uri bioconda/linux-64::perl-uri-1.76-pl526_0
perl-www-robotrul~ bioconda/linux-64::perl-www-robotrules-6.02-pl526_3
perl-xml-dom bioconda/linux-64::perl-xml-dom-1.46-pl526_0
perl-xml-dom-xpath bioconda/linux-64::perl-xml-dom-xpath-0.14-pl526_1
perl-xml-filter-b~ bioconda/linux-64::perl-xml-filter-buffertext-1.01-pl526_2
perl-xml-libxml bioconda/linux-64::perl-xml-libxml-2.0132-pl526h7ec2d77_1
perl-xml-libxslt bioconda/linux-64::perl-xml-libxslt-1.94-pl526_1
perl-xml-namespac~ bioconda/linux-64::perl-xml-namespacesupport-1.12-pl526_0
perl-xml-parser bioconda/linux-64::perl-xml-parser-2.44-pl526h4e0c4b3_7
perl-xml-regexp bioconda/linux-64::perl-xml-regexp-0.04-pl526_2
perl-xml-sax bioconda/noarch::perl-xml-sax-1.02-pl526_0
perl-xml-sax-base bioconda/linux-64::perl-xml-sax-base-1.09-pl526_0
perl-xml-sax-expat bioconda/linux-64::perl-xml-sax-expat-0.51-pl526_3
perl-xml-sax-writ~ bioconda/linux-64::perl-xml-sax-writer-0.57-pl526_0
perl-xml-simple bioconda/linux-64::perl-xml-simple-2.25-pl526_1
perl-xml-twig bioconda/linux-64::perl-xml-twig-3.52-pl526_2
perl-xml-writer bioconda/linux-64::perl-xml-writer-0.625-pl526_2
perl-xml-xpath bioconda/linux-64::perl-xml-xpath-1.44-pl526_0
perl-xml-xpatheng~ bioconda/linux-64::perl-xml-xpathengine-0.14-pl526_2
perl-xsloader bioconda/linux-64::perl-xsloader-0.24-pl526_0
perl-yaml bioconda/noarch::perl-yaml-1.29-pl526_0
pip conda-forge/linux-64::pip-19.3.1-py37_0
pixman conda-forge/linux-64::pixman-0.38.0-h516909a_1003
pthread-stubs conda-forge/linux-64::pthread-stubs-0.4-h14c3975_1001
python conda-forge/linux-64::python-3.7.6-h357f687_2
r-base conda-forge/linux-64::r-base-3.5.1-hc461eb7_1012
readline conda-forge/linux-64::readline-8.0-hf8c457e_0
setuptools conda-forge/linux-64::setuptools-44.0.0-py37_0
sqlite conda-forge/linux-64::sqlite-3.30.1-hcee41ef_0
t_coffee bioconda/linux-64::t_coffee-11.0.8-py37hea885bf_8
tidyp bioconda/linux-64::tidyp-1.04-1
tk conda-forge/linux-64::tk-8.6.10-hed695b0_0
tktable conda-forge/linux-64::tktable-2.10-h555a92e_3
wheel conda-forge/linux-64::wheel-0.33.6-py37_0
xorg-kbproto conda-forge/linux-64::xorg-kbproto-1.0.7-h14c3975_1002
xorg-libice conda-forge/linux-64::xorg-libice-1.0.10-h516909a_0
xorg-libsm conda-forge/linux-64::xorg-libsm-1.2.3-h84519dc_1000
xorg-libx11 conda-forge/linux-64::xorg-libx11-1.6.9-h516909a_0
xorg-libxau conda-forge/linux-64::xorg-libxau-1.0.9-h14c3975_0
xorg-libxdmcp conda-forge/linux-64::xorg-libxdmcp-1.1.3-h516909a_0
xorg-libxext conda-forge/linux-64::xorg-libxext-1.3.4-h516909a_0
xorg-libxpm conda-forge/linux-64::xorg-libxpm-3.5.13-h516909a_0
xorg-libxrender conda-forge/linux-64::xorg-libxrender-0.9.10-h516909a_1002
xorg-libxt conda-forge/linux-64::xorg-libxt-1.1.5-h516909a_1003
xorg-renderproto conda-forge/linux-64::xorg-renderproto-0.11.1-h14c3975_1002
xorg-xextproto conda-forge/linux-64::xorg-xextproto-7.3.0-h14c3975_1002
xorg-xproto conda-forge/linux-64::xorg-xproto-7.0.31-h14c3975_1007
xz conda-forge/linux-64::xz-5.2.4-h14c3975_1001
zlib conda-forge/linux-64::zlib-1.2.11-h516909a_1006
zstd conda-forge/linux-64::zstd-1.4.4-h3b9ef0a_1
Proceed ([y]/n)? y
Downloading and Extracting Packages
agat-0.1.0 | 215 KB | ################################################################################################################################################################################################ | 100%
libwebp-1.0.2 | 938 KB | ################################################################################################################################################################################################ | 100%
gfortran_linux-64-7. | 21 KB | ################################################################################################################################################################################################ | 100%
binutils_linux-64-2. | 21 KB | ################################################################################################################################################################################################ | 100%
python-3.7.6 | 52.9 MB | ################################################################################################################################################################################################ | 100%
giflib-5.2.1 | 73 KB | ################################################################################################################################################################################################ | 100%
gfortran_impl_linux- | 9.3 MB | ################################################################################################################################################################################################ | 100%
gcc_linux-64-7.3.0 | 22 KB | ################################################################################################################################################################################################ | 100%
ld_impl_linux-64-2.3 | 653 KB | ################################################################################################################################################################################################ | 100%
xorg-libxpm-3.5.13 | 63 KB | ################################################################################################################################################################################################ | 100%
setuptools-44.0.0 | 659 KB | ################################################################################################################################################################################################ | 100%
gxx_linux-64-7.3.0 | 21 KB | ################################################################################################################################################################################################ | 100%
r-base-3.5.1 | 30.4 MB | ################################################################################################################################################################################################ | 100%
libtiff-4.1.0 | 568 KB | ################################################################################################################################################################################################ | 100%
libgfortran-ng-7.3.0 | 1.7 MB | ################################################################################################################################################################################################ | 100%
Preparing transaction: done
Verifying transaction: failed
CondaMultiError: CondaVerificationError: The package for cairo located at /work/waterhouse_team/miniconda2/pkgs/cairo-1.16.0-hfb77d84_1002
appears to be corrupted. The path 'lib/cairo/libcairo-trace.a'
specified in the package manifest cannot be found.
CondaVerificationError: The package for cairo located at /work/waterhouse_team/miniconda2/pkgs/cairo-1.16.0-hfb77d84_1002
appears to be corrupted. The path 'lib/libcairo-gobject.a'
specified in the package manifest cannot be found.
CondaVerificationError: The package for cairo located at /work/waterhouse_team/miniconda2/pkgs/cairo-1.16.0-hfb77d84_1002
appears to be corrupted. The path 'lib/libcairo-script-interpreter.a'
specified in the package manifest cannot be found.
What did I miss?
Thank you in advance,
I don’t understand, it sounds conda try to install much more things than needed for AGAT. Did you update conda? It sounds you have python2 and it install python3 first. You could try (remove the agat env first):
conda create -n agat python=3 conda activate agat conda --install -c bioconda agat
What do you mean with update conda? I tried your commands and still the same problems:
(base) lorencm@lyra04:~> conda env remove --name agat
Remove all packages in environment /work/waterhouse_team/miniconda2/envs/agat:
(base) lorencm@lyra04:~> rm -r /work/waterhouse_team/miniconda2/envs/agat
rm: cannot remove '/work/waterhouse_team/miniconda2/envs/agat': No such file or directory
(base) lorencm@lyra04:~> conda create -n agat python=3
Collecting package metadata (repodata.json): done
Solving environment: done
==> WARNING: A newer version of conda exists. <==
current version: 4.7.12
latest version: 4.8.1
Please update conda by running
$ conda update -n base -c defaults conda
## Package Plan ##
environment location: /work/waterhouse_team/miniconda2/envs/agat
added / updated specs:
- python=3
The following packages will be downloaded:
package | build
---------------------------|-----------------
_openmp_mutex-4.5 | 0_gnu 435 KB conda-forge
certifi-2019.11.28 | py38_0 148 KB conda-forge
libgcc-ng-9.2.0 | h24d8f2e_2 8.2 MB conda-forge
libgomp-9.2.0 | h24d8f2e_2 816 KB conda-forge
libstdcxx-ng-9.2.0 | hdf63c60_2 4.5 MB conda-forge
pip-19.3.1 | py38_0 1.9 MB conda-forge
python-3.8.1 | h357f687_1 58.1 MB conda-forge
setuptools-44.0.0 | py38_0 642 KB conda-forge
wheel-0.33.6 | py38_0 35 KB conda-forge
------------------------------------------------------------
Total: 74.7 MB
The following NEW packages will be INSTALLED:
_libgcc_mutex conda-forge/linux-64::_libgcc_mutex-0.1-conda_forge
_openmp_mutex conda-forge/linux-64::_openmp_mutex-4.5-0_gnu
ca-certificates conda-forge/linux-64::ca-certificates-2019.11.28-hecc5488_0
certifi conda-forge/linux-64::certifi-2019.11.28-py38_0
ld_impl_linux-64 conda-forge/linux-64::ld_impl_linux-64-2.33.1-h53a641e_7
libffi conda-forge/linux-64::libffi-3.2.1-he1b5a44_1006
libgcc-ng conda-forge/linux-64::libgcc-ng-9.2.0-h24d8f2e_2
libgomp conda-forge/linux-64::libgomp-9.2.0-h24d8f2e_2
libstdcxx-ng conda-forge/linux-64::libstdcxx-ng-9.2.0-hdf63c60_2
ncurses conda-forge/linux-64::ncurses-6.1-hf484d3e_1002
openssl conda-forge/linux-64::openssl-1.1.1d-h516909a_0
pip conda-forge/linux-64::pip-19.3.1-py38_0
python conda-forge/linux-64::python-3.8.1-h357f687_1
readline conda-forge/linux-64::readline-8.0-hf8c457e_0
setuptools conda-forge/linux-64::setuptools-44.0.0-py38_0
sqlite conda-forge/linux-64::sqlite-3.30.1-hcee41ef_0
tk conda-forge/linux-64::tk-8.6.10-hed695b0_0
wheel conda-forge/linux-64::wheel-0.33.6-py38_0
xz conda-forge/linux-64::xz-5.2.4-h14c3975_1001
zlib conda-forge/linux-64::zlib-1.2.11-h516909a_1006
Proceed ([y]/n)? y
Downloading and Extracting Packages
pip-19.3.1 | 1.9 MB | ################################################################################################################################################################# | 100%
_openmp_mutex-4.5 | 435 KB | ################################################################################################################################################################# | 100%
python-3.8.1 | 58.1 MB | ################################################################################################################################################################# | 100%
setuptools-44.0.0 | 642 KB | ################################################################################################################################################################# | 100%
libstdcxx-ng-9.2.0 | 4.5 MB | ################################################################################################################################################################# | 100%
libgomp-9.2.0 | 816 KB | ################################################################################################################################################################# | 100%
certifi-2019.11.28 | 148 KB | ################################################################################################################################################################# | 100%
libgcc-ng-9.2.0 | 8.2 MB | ################################################################################################################################################################# | 100%
wheel-0.33.6 | 35 KB | ################################################################################################################################################################# | 100%
Preparing transaction: done
Verifying transaction: done
Executing transaction: done
#
# To activate this environment, use
#
# $ conda activate agat
#
# To deactivate an active environment, use
#
# $ conda deactivate
(base) lorencm@lyra04:~> conda activate agat
(agat) lorencm@lyra04:~> conda --install -c bioconda agat
CommandNotFoundError: No command 'conda bioconda'.
(agat) lorencm@lyra04:~> conda install -c bioconda agat
Collecting package metadata (repodata.json): done
Solving environment: done
==> WARNING: A newer version of conda exists. <==
current version: 4.7.12
latest version: 4.8.1
Please update conda by running
$ conda update -n base -c defaults conda
## Package Plan ##
environment location: /work/waterhouse_team/miniconda2/envs/agat
added / updated specs:
- agat
The following packages will be downloaded:
package | build
---------------------------|-----------------
gcc_impl_linux-64-7.3.0 | hd420e75_4 70.6 MB conda-forge
gfortran_impl_linux-64-7.3.0| hdf63c60_4 9.4 MB conda-forge
gxx_impl_linux-64-7.3.0 | hdf63c60_4 19.1 MB conda-forge
libgfortran-ng-7.3.0 | hdf63c60_4 1.7 MB conda-forge
------------------------------------------------------------
Total: 100.8 MB
The following NEW packages will be INSTALLED:
_r-mutex conda-forge/noarch::_r-mutex-1.0.1-anacondar_1
agat bioconda/noarch::agat-0.1.0-pl526r35_0
binutils_impl_lin~ conda-forge/linux-64::binutils_impl_linux-64-2.33.1-he1b5a44_7
binutils_linux-64 conda-forge/linux-64::binutils_linux-64-2.33.1-h9595d00_16
bwidget conda-forge/linux-64::bwidget-1.9.14-0
bzip2 conda-forge/linux-64::bzip2-1.0.8-h516909a_2
cairo conda-forge/linux-64::cairo-1.16.0-hfb77d84_1002
clustalw bioconda/linux-64::clustalw-2.1-hc9558a2_5
curl conda-forge/linux-64::curl-7.65.3-hf8cf82a_0
expat conda-forge/linux-64::expat-2.2.5-he1b5a44_1004
fontconfig conda-forge/linux-64::fontconfig-2.13.1-h86ecdb6_1001
freetype conda-forge/linux-64::freetype-2.10.0-he983fc9_1
fribidi conda-forge/linux-64::fribidi-1.0.5-h516909a_1002
gcc_impl_linux-64 conda-forge/linux-64::gcc_impl_linux-64-7.3.0-hd420e75_4
gcc_linux-64 conda-forge/linux-64::gcc_linux-64-7.3.0-h553295d_16
gettext conda-forge/linux-64::gettext-0.19.8.1-hc5be6a0_1002
gfortran_impl_lin~ conda-forge/linux-64::gfortran_impl_linux-64-7.3.0-hdf63c60_4
gfortran_linux-64 conda-forge/linux-64::gfortran_linux-64-7.3.0-h553295d_16
giflib conda-forge/linux-64::giflib-5.2.1-h516909a_1
glib conda-forge/linux-64::glib-2.58.3-py37h6f030ca_1002
graphite2 conda-forge/linux-64::graphite2-1.3.13-hf484d3e_1000
graphviz conda-forge/linux-64::graphviz-2.42.3-h0511662_0
gsl conda-forge/linux-64::gsl-2.5-h294904e_1
gxx_impl_linux-64 conda-forge/linux-64::gxx_impl_linux-64-7.3.0-hdf63c60_4
gxx_linux-64 conda-forge/linux-64::gxx_linux-64-7.3.0-h553295d_16
harfbuzz conda-forge/linux-64::harfbuzz-2.4.0-h9f30f68_3
icu conda-forge/linux-64::icu-64.2-he1b5a44_1
jpeg conda-forge/linux-64::jpeg-9c-h14c3975_1001
krb5 conda-forge/linux-64::krb5-1.16.4-h2fd8d38_0
libblas conda-forge/linux-64::libblas-3.8.0-14_openblas
libcblas conda-forge/linux-64::libcblas-3.8.0-14_openblas
libcurl conda-forge/linux-64::libcurl-7.65.3-hda55be3_0
libdb bioconda/linux-64::libdb-6.1.26-0
libedit conda-forge/linux-64::libedit-3.1.20170329-hf8c457e_1001
libgcc conda-forge/linux-64::libgcc-7.2.0-h69d50b8_2
libgd conda-forge/linux-64::libgd-2.2.5-h307a58e_1007
libgfortran-ng conda-forge/linux-64::libgfortran-ng-7.3.0-hdf63c60_4
libiconv conda-forge/linux-64::libiconv-1.15-h516909a_1005
libopenblas conda-forge/linux-64::libopenblas-0.3.7-h5ec1e0e_6
libpng conda-forge/linux-64::libpng-1.6.37-hed695b0_0
libssh2 conda-forge/linux-64::libssh2-1.8.2-h22169c7_2
libtiff conda-forge/linux-64::libtiff-4.1.0-hc3755c2_3
libtool conda-forge/linux-64::libtool-2.4.6-h14c3975_1002
libuuid conda-forge/linux-64::libuuid-2.32.1-h14c3975_1000
libwebp conda-forge/linux-64::libwebp-1.0.2-h56121f0_5
libxcb conda-forge/linux-64::libxcb-1.13-h14c3975_1002
libxml2 conda-forge/linux-64::libxml2-2.9.10-hee79883_0
libxslt conda-forge/linux-64::libxslt-1.1.33-h31b3aaa_0
lz4-c conda-forge/linux-64::lz4-c-1.8.3-he1b5a44_1001
make conda-forge/linux-64::make-4.2.1-h14c3975_2004
paml bioconda/linux-64::paml-4.9-h516909a_5
pango conda-forge/linux-64::pango-1.42.4-ha030887_1
pcre conda-forge/linux-64::pcre-8.43-he1b5a44_0
perl conda-forge/linux-64::perl-5.26.2-h516909a_1006
perl-aceperl bioconda/linux-64::perl-aceperl-1.92-pl526_2
perl-algorithm-di~ bioconda/linux-64::perl-algorithm-diff-1.1903-pl526_2
perl-algorithm-mu~ bioconda/linux-64::perl-algorithm-munkres-0.08-pl526_1
perl-apache-test bioconda/linux-64::perl-apache-test-1.40-pl526_1
perl-app-cpanminus bioconda/linux-64::perl-app-cpanminus-1.7044-pl526_1
perl-appconfig bioconda/linux-64::perl-appconfig-1.71-pl526_1
perl-array-compare bioconda/linux-64::perl-array-compare-3.0.1-pl526_1
perl-autoloader bioconda/linux-64::perl-autoloader-5.74-pl526_2
perl-base bioconda/linux-64::perl-base-2.23-pl526_1
perl-bio-asn1-ent~ bioconda/noarch::perl-bio-asn1-entrezgene-1.73-pl526_1
perl-bio-coordina~ bioconda/noarch::perl-bio-coordinate-1.007001-pl526_1
perl-bio-featureio bioconda/noarch::perl-bio-featureio-1.6.905-pl526_2
perl-bio-phylo bioconda/noarch::perl-bio-phylo-0.58-pl526_2
perl-bio-samtools bioconda/linux-64::perl-bio-samtools-1.43-pl526h1341992_1
perl-bio-tools-ph~ bioconda/noarch::perl-bio-tools-phylo-paml-1.7.3-pl526_1
perl-bio-tools-ru~ bioconda/noarch::perl-bio-tools-run-alignment-clustalw-1.7.4-pl526_1
perl-bio-tools-ru~ bioconda/noarch::perl-bio-tools-run-alignment-tcoffee-1.7.4-pl526_2
perl-bioperl bioconda/noarch::perl-bioperl-1.7.2-pl526_11
perl-bioperl-core bioconda/noarch::perl-bioperl-core-1.007002-pl526_2
perl-bioperl-run bioconda/noarch::perl-bioperl-run-1.007002-pl526_4
perl-business-isbn bioconda/linux-64::perl-business-isbn-3.004-pl526_0
perl-business-isb~ bioconda/linux-64::perl-business-isbn-data-20140910.003-pl526_0
perl-cache-cache bioconda/linux-64::perl-cache-cache-1.08-pl526_0
perl-capture-tiny bioconda/linux-64::perl-capture-tiny-0.48-pl526_0
perl-carp bioconda/linux-64::perl-carp-1.38-pl526_3
perl-cgi bioconda/linux-64::perl-cgi-4.44-pl526h14c3975_1
perl-class-data-i~ bioconda/linux-64::perl-class-data-inheritable-0.08-pl526_1
perl-class-inspec~ bioconda/linux-64::perl-class-inspector-1.34-pl526_0
perl-class-load bioconda/linux-64::perl-class-load-0.25-pl526_0
perl-class-load-xs bioconda/linux-64::perl-class-load-xs-0.10-pl526h6bb024c_2
perl-class-method~ bioconda/linux-64::perl-class-method-modifiers-2.12-pl526_0
perl-clone bioconda/linux-64::perl-clone-0.42-pl526h516909a_0
perl-common-sense bioconda/linux-64::perl-common-sense-3.74-pl526_2
perl-compress-raw~ bioconda/linux-64::perl-compress-raw-zlib-2.087-pl526hc9558a2_0
perl-constant bioconda/linux-64::perl-constant-1.33-pl526_1
perl-convert-bina~ bioconda/linux-64::perl-convert-binary-c-0.78-pl526h6bb024c_3
perl-convert-binh~ bioconda/linux-64::perl-convert-binhex-1.125-pl526_1
perl-crypt-rc4 bioconda/linux-64::perl-crypt-rc4-2.02-pl526_1
perl-data-dumper bioconda/linux-64::perl-data-dumper-2.173-pl526_0
perl-data-optlist bioconda/linux-64::perl-data-optlist-0.110-pl526_2
perl-data-stag bioconda/linux-64::perl-data-stag-0.14-pl526_1
perl-date-format bioconda/linux-64::perl-date-format-2.30-pl526_2
perl-db-file bioconda/linux-64::perl-db-file-1.852-pl526h14c3975_0
perl-dbd-sqlite bioconda/linux-64::perl-dbd-sqlite-1.64-pl526h516909a_0
perl-dbi bioconda/linux-64::perl-dbi-1.642-pl526_0
perl-devel-global~ bioconda/linux-64::perl-devel-globaldestruction-0.14-pl526_0
perl-devel-overlo~ bioconda/linux-64::perl-devel-overloadinfo-0.005-pl526_0
perl-devel-stackt~ bioconda/noarch::perl-devel-stacktrace-2.04-pl526_0
perl-digest-hmac bioconda/linux-64::perl-digest-hmac-1.03-pl526_3
perl-digest-md5 bioconda/linux-64::perl-digest-md5-2.55-pl526_0
perl-digest-perl-~ bioconda/linux-64::perl-digest-perl-md5-1.9-pl526_1
perl-digest-sha1 bioconda/linux-64::perl-digest-sha1-2.13-pl526h6bb024c_1
perl-dist-checkco~ bioconda/linux-64::perl-dist-checkconflicts-0.11-pl526_2
perl-dynaloader bioconda/linux-64::perl-dynaloader-1.25-pl526_1
perl-email-date-f~ bioconda/linux-64::perl-email-date-format-1.005-pl526_2
perl-encode bioconda/linux-64::perl-encode-2.88-pl526_1
perl-encode-locale bioconda/linux-64::perl-encode-locale-1.05-pl526_6
perl-error bioconda/linux-64::perl-error-0.17027-pl526_1
perl-eval-closure bioconda/linux-64::perl-eval-closure-0.14-pl526h6bb024c_4
perl-exception-cl~ bioconda/linux-64::perl-exception-class-1.44-pl526_0
perl-exporter bioconda/linux-64::perl-exporter-5.72-pl526_1
perl-exporter-tiny bioconda/linux-64::perl-exporter-tiny-1.002001-pl526_0
perl-extutils-mak~ bioconda/linux-64::perl-extutils-makemaker-7.36-pl526_1
perl-file-listing bioconda/linux-64::perl-file-listing-6.04-pl526_1
perl-file-path bioconda/linux-64::perl-file-path-2.16-pl526_0
perl-file-share bioconda/linux-64::perl-file-share-0.25-pl526_2
perl-file-sharedir bioconda/linux-64::perl-file-sharedir-1.116-pl526_1
perl-file-sharedi~ bioconda/linux-64::perl-file-sharedir-install-0.13-pl526_0
perl-file-slurp-t~ bioconda/linux-64::perl-file-slurp-tiny-0.004-pl526_1
perl-file-sort bioconda/linux-64::perl-file-sort-1.01-pl526_2
perl-file-temp bioconda/linux-64::perl-file-temp-0.2304-pl526_2
perl-file-which bioconda/linux-64::perl-file-which-1.23-pl526_0
perl-font-afm bioconda/linux-64::perl-font-afm-1.20-pl526_2
perl-font-ttf bioconda/linux-64::perl-font-ttf-1.06-pl526_0
perl-gd bioconda/linux-64::perl-gd-2.71-pl526he860b03_0
perl-getopt-long bioconda/linux-64::perl-getopt-long-2.50-pl526_1
perl-graph bioconda/linux-64::perl-graph-0.9704-pl526_1
perl-graphviz bioconda/linux-64::perl-graphviz-2.24-pl526h734ff71_0
perl-html-element~ bioconda/linux-64::perl-html-element-extended-1.18-pl526_1
perl-html-entitie~ bioconda/linux-64::perl-html-entities-numbered-0.04-pl526_1
perl-html-formatt~ bioconda/linux-64::perl-html-formatter-2.16-pl526_0
perl-html-parser bioconda/linux-64::perl-html-parser-3.72-pl526h6bb024c_5
perl-html-tableex~ bioconda/linux-64::perl-html-tableextract-2.13-pl526_2
perl-html-tagset bioconda/linux-64::perl-html-tagset-3.20-pl526_3
perl-html-tidy bioconda/linux-64::perl-html-tidy-1.60-pl526_0
perl-html-tree bioconda/linux-64::perl-html-tree-5.07-pl526_1
perl-html-treebui~ bioconda/linux-64::perl-html-treebuilder-xpath-0.14-pl526_1
perl-http-cookies bioconda/linux-64::perl-http-cookies-6.04-pl526_0
perl-http-daemon bioconda/linux-64::perl-http-daemon-6.01-pl526_1
perl-http-date bioconda/linux-64::perl-http-date-6.02-pl526_3
perl-http-message bioconda/linux-64::perl-http-message-6.18-pl526_0
perl-http-negotia~ bioconda/linux-64::perl-http-negotiate-6.01-pl526_3
perl-image-info bioconda/linux-64::perl-image-info-1.38-pl526_1
perl-image-size bioconda/linux-64::perl-image-size-3.300-pl526_2
perl-io-html bioconda/linux-64::perl-io-html-1.001-pl526_2
perl-io-sessionda~ bioconda/linux-64::perl-io-sessiondata-1.03-pl526_1
perl-io-socket-ssl bioconda/linux-64::perl-io-socket-ssl-2.066-pl526_0
perl-io-string bioconda/linux-64::perl-io-string-1.08-pl526_3
perl-io-stringy bioconda/linux-64::perl-io-stringy-2.111-pl526_1
perl-io-tty bioconda/linux-64::perl-io-tty-1.12-pl526_1
perl-ipc-run bioconda/linux-64::perl-ipc-run-20180523.0-pl526_0
perl-ipc-sharelite bioconda/linux-64::perl-ipc-sharelite-0.17-pl526h6bb024c_1
perl-jcode bioconda/linux-64::perl-jcode-2.07-pl526_2
perl-json bioconda/linux-64::perl-json-4.02-pl526_0
perl-json-xs bioconda/linux-64::perl-json-xs-2.34-pl526h6bb024c_3
perl-lib bioconda/linux-64::perl-lib-0.63-pl526_1
perl-libwww-perl bioconda/noarch::perl-libwww-perl-6.39-pl526_0
perl-libxml-perl bioconda/linux-64::perl-libxml-perl-0.08-pl526_2
perl-list-moreuti~ bioconda/linux-64::perl-list-moreutils-0.428-pl526_1
perl-list-moreuti~ bioconda/linux-64::perl-list-moreutils-xs-0.428-pl526_0
perl-lwp-mediatyp~ bioconda/linux-64::perl-lwp-mediatypes-6.04-pl526_0
perl-lwp-protocol~ bioconda/linux-64::perl-lwp-protocol-https-6.07-pl526_4
perl-lwp-simple bioconda/linux-64::perl-lwp-simple-6.15-pl526h470a237_4
perl-mailtools bioconda/noarch::perl-mailtools-2.21-pl526_0
perl-math-cdf bioconda/linux-64::perl-math-cdf-0.1-pl526h14c3975_5
perl-math-derivat~ bioconda/linux-64::perl-math-derivative-1.01-pl526_0
perl-math-random bioconda/linux-64::perl-math-random-0.72-pl526h14c3975_2
perl-math-spline bioconda/linux-64::perl-math-spline-0.02-pl526_2
perl-mime-base64 bioconda/linux-64::perl-mime-base64-3.15-pl526_1
perl-mime-lite bioconda/linux-64::perl-mime-lite-3.030-pl526_1
perl-mime-tools bioconda/linux-64::perl-mime-tools-5.508-pl526_1
perl-mime-types bioconda/linux-64::perl-mime-types-2.17-pl526_0
perl-mldbm bioconda/linux-64::perl-mldbm-2.05-pl526_1
perl-module-imple~ bioconda/linux-64::perl-module-implementation-0.09-pl526_2
perl-module-runti~ bioconda/linux-64::perl-module-runtime-0.016-pl526_1
perl-module-runti~ bioconda/linux-64::perl-module-runtime-conflicts-0.003-pl526_0
perl-moo bioconda/linux-64::perl-moo-2.003004-pl526_0
perl-moose bioconda/linux-64::perl-moose-2.2011-pl526hf484d3e_1
perl-mozilla-ca bioconda/linux-64::perl-mozilla-ca-20180117-pl526_1
perl-mro-compat bioconda/linux-64::perl-mro-compat-0.13-pl526_0
perl-net-http bioconda/noarch::perl-net-http-6.19-pl526_0
perl-net-ssleay bioconda/linux-64::perl-net-ssleay-1.88-pl526h90d6eec_0
perl-ntlm bioconda/linux-64::perl-ntlm-1.09-pl526_4
perl-ole-storage_~ bioconda/linux-64::perl-ole-storage_lite-0.19-pl526_3
perl-package-depr~ bioconda/linux-64::perl-package-deprecationmanager-0.17-pl526_0
perl-package-stash bioconda/linux-64::perl-package-stash-0.38-pl526hf484d3e_1
perl-package-stas~ bioconda/linux-64::perl-package-stash-xs-0.28-pl526hf484d3e_1
perl-params-util bioconda/linux-64::perl-params-util-1.07-pl526h6bb024c_4
perl-parent bioconda/linux-64::perl-parent-0.236-pl526_1
perl-parse-recdes~ bioconda/linux-64::perl-parse-recdescent-1.967015-pl526_0
perl-pathtools bioconda/linux-64::perl-pathtools-3.75-pl526h14c3975_1
perl-pdf-api2 bioconda/noarch::perl-pdf-api2-2.035-pl526_0
perl-pod-escapes bioconda/linux-64::perl-pod-escapes-1.07-pl526_1
perl-pod-usage bioconda/linux-64::perl-pod-usage-1.69-pl526_1
perl-postscript bioconda/linux-64::perl-postscript-0.06-pl526_2
perl-regexp-common bioconda/linux-64::perl-regexp-common-2017060201-pl526_0
perl-role-tiny bioconda/noarch::perl-role-tiny-2.000008-pl526_0
perl-scalar-list-~ bioconda/linux-64::perl-scalar-list-utils-1.52-pl526h516909a_0
perl-set-scalar bioconda/linux-64::perl-set-scalar-1.29-pl526_2
perl-soap-lite bioconda/linux-64::perl-soap-lite-1.19-pl526_1
perl-socket bioconda/linux-64::perl-socket-2.027-pl526_1
perl-sort-natural~ bioconda/linux-64::perl-sort-naturally-1.03-pl526_2
perl-spreadsheet-~ bioconda/linux-64::perl-spreadsheet-parseexcel-0.65-pl526_2
perl-spreadsheet-~ bioconda/linux-64::perl-spreadsheet-writeexcel-2.40-pl526_2
perl-statistics-d~ bioconda/linux-64::perl-statistics-descriptive-3.0702-pl526_0
perl-statistics-r bioconda/linux-64::perl-statistics-r-0.34-pl526r351_3
perl-storable bioconda/linux-64::perl-storable-3.15-pl526h14c3975_0
perl-sub-exporter bioconda/linux-64::perl-sub-exporter-0.987-pl526_2
perl-sub-exporter~ bioconda/linux-64::perl-sub-exporter-progressive-0.001013-pl526_0
perl-sub-identify bioconda/linux-64::perl-sub-identify-0.14-pl526h14c3975_0
perl-sub-install bioconda/linux-64::perl-sub-install-0.928-pl526_2
perl-sub-name bioconda/linux-64::perl-sub-name-0.21-pl526_1
perl-sub-quote bioconda/linux-64::perl-sub-quote-2.006003-pl526_1
perl-sub-uplevel bioconda/linux-64::perl-sub-uplevel-0.2800-pl526h14c3975_2
perl-svg bioconda/linux-64::perl-svg-2.84-pl526_0
perl-svg-graph bioconda/linux-64::perl-svg-graph-0.02-pl526_3
perl-task-weaken bioconda/linux-64::perl-task-weaken-1.06-pl526_0
perl-template-too~ bioconda/linux-64::perl-template-toolkit-2.26-pl526_1
perl-test bioconda/linux-64::perl-test-1.26-pl526_1
perl-test-deep bioconda/linux-64::perl-test-deep-1.128-pl526_1
perl-test-differe~ bioconda/noarch::perl-test-differences-0.67-pl526_0
perl-test-excepti~ bioconda/linux-64::perl-test-exception-0.43-pl526_2
perl-test-harness bioconda/linux-64::perl-test-harness-3.42-pl526_0
perl-test-leaktra~ bioconda/linux-64::perl-test-leaktrace-0.16-pl526h14c3975_2
perl-test-most bioconda/linux-64::perl-test-most-0.35-pl526_0
perl-test-require~ bioconda/linux-64::perl-test-requiresinternet-0.05-pl526_0
perl-test-warn bioconda/linux-64::perl-test-warn-0.36-pl526_1
perl-text-balanced bioconda/linux-64::perl-text-balanced-2.03-pl526_3
perl-text-diff bioconda/linux-64::perl-text-diff-1.45-pl526_0
perl-text-wrap bioconda/linux-64::perl-text-wrap-2013.0523-pl526_1
perl-tie-ixhash bioconda/linux-64::perl-tie-ixhash-1.23-pl526_2
perl-time-hires bioconda/linux-64::perl-time-hires-1.9760-pl526h14c3975_1
perl-time-local bioconda/linux-64::perl-time-local-1.28-pl526_1
perl-timedate bioconda/linux-64::perl-timedate-2.30-pl526_1
perl-tree-dag_node bioconda/linux-64::perl-tree-dag_node-1.31-pl526_0
perl-try-tiny bioconda/linux-64::perl-try-tiny-0.30-pl526_1
perl-type-tiny bioconda/linux-64::perl-type-tiny-1.004004-pl526_0
perl-types-serial~ bioconda/linux-64::perl-types-serialiser-1.0-pl526_2
perl-unicode-map bioconda/linux-64::perl-unicode-map-0.112-pl526h6bb024c_3
perl-uri bioconda/linux-64::perl-uri-1.76-pl526_0
perl-www-robotrul~ bioconda/linux-64::perl-www-robotrules-6.02-pl526_3
perl-xml-dom bioconda/linux-64::perl-xml-dom-1.46-pl526_0
perl-xml-dom-xpath bioconda/linux-64::perl-xml-dom-xpath-0.14-pl526_1
perl-xml-filter-b~ bioconda/linux-64::perl-xml-filter-buffertext-1.01-pl526_2
perl-xml-libxml bioconda/linux-64::perl-xml-libxml-2.0132-pl526h7ec2d77_1
perl-xml-libxslt bioconda/linux-64::perl-xml-libxslt-1.94-pl526_1
perl-xml-namespac~ bioconda/linux-64::perl-xml-namespacesupport-1.12-pl526_0
perl-xml-parser bioconda/linux-64::perl-xml-parser-2.44-pl526h4e0c4b3_7
perl-xml-regexp bioconda/linux-64::perl-xml-regexp-0.04-pl526_2
perl-xml-sax bioconda/noarch::perl-xml-sax-1.02-pl526_0
perl-xml-sax-base bioconda/linux-64::perl-xml-sax-base-1.09-pl526_0
perl-xml-sax-expat bioconda/linux-64::perl-xml-sax-expat-0.51-pl526_3
perl-xml-sax-writ~ bioconda/linux-64::perl-xml-sax-writer-0.57-pl526_0
perl-xml-simple bioconda/linux-64::perl-xml-simple-2.25-pl526_1
perl-xml-twig bioconda/linux-64::perl-xml-twig-3.52-pl526_2
perl-xml-writer bioconda/linux-64::perl-xml-writer-0.625-pl526_2
perl-xml-xpath bioconda/linux-64::perl-xml-xpath-1.44-pl526_0
perl-xml-xpatheng~ bioconda/linux-64::perl-xml-xpathengine-0.14-pl526_2
perl-xsloader bioconda/linux-64::perl-xsloader-0.24-pl526_0
perl-yaml bioconda/noarch::perl-yaml-1.29-pl526_0
pixman conda-forge/linux-64::pixman-0.38.0-h516909a_1003
pthread-stubs conda-forge/linux-64::pthread-stubs-0.4-h14c3975_1001
r-base conda-forge/linux-64::r-base-3.5.1-hc461eb7_1012
t_coffee bioconda/linux-64::t_coffee-11.0.8-py37hea885bf_8
tidyp bioconda/linux-64::tidyp-1.04-1
tktable conda-forge/linux-64::tktable-2.10-h555a92e_3
xorg-kbproto conda-forge/linux-64::xorg-kbproto-1.0.7-h14c3975_1002
xorg-libice conda-forge/linux-64::xorg-libice-1.0.10-h516909a_0
xorg-libsm conda-forge/linux-64::xorg-libsm-1.2.3-h84519dc_1000
xorg-libx11 conda-forge/linux-64::xorg-libx11-1.6.9-h516909a_0
xorg-libxau conda-forge/linux-64::xorg-libxau-1.0.9-h14c3975_0
xorg-libxdmcp conda-forge/linux-64::xorg-libxdmcp-1.1.3-h516909a_0
xorg-libxext conda-forge/linux-64::xorg-libxext-1.3.4-h516909a_0
xorg-libxpm conda-forge/linux-64::xorg-libxpm-3.5.13-h516909a_0
xorg-libxrender conda-forge/linux-64::xorg-libxrender-0.9.10-h516909a_1002
xorg-libxt conda-forge/linux-64::xorg-libxt-1.1.5-h516909a_1003
xorg-renderproto conda-forge/linux-64::xorg-renderproto-0.11.1-h14c3975_1002
xorg-xextproto conda-forge/linux-64::xorg-xextproto-7.3.0-h14c3975_1002
xorg-xproto conda-forge/linux-64::xorg-xproto-7.0.31-h14c3975_1007
zstd conda-forge/linux-64::zstd-1.4.4-h3b9ef0a_1
The following packages will be DOWNGRADED:
certifi 2019.11.28-py38_0 --> 2019.11.28-py37_0
pip 19.3.1-py38_0 --> 19.3.1-py37_0
python 3.8.1-h357f687_1 --> 3.7.6-h357f687_2
setuptools 44.0.0-py38_0 --> 44.0.0-py37_0
wheel 0.33.6-py38_0 --> 0.33.6-py37_0
Proceed ([y]/n)? y
Downloading and Extracting Packages
gfortran_impl_linux- | 9.4 MB | ################################################################################################################################################################# | 100%
gxx_impl_linux-64-7. | 19.1 MB | ################################################################################################################################################################# | 100%
gcc_impl_linux-64-7. | 70.6 MB | ################################################################################################################################################################# | 100%
libgfortran-ng-7.3.0 | 1.7 MB | ################################################################################################################################################################# | 100%
Preparing transaction: done
Verifying transaction: failed
CondaMultiError: CondaVerificationError: The package for cairo located at /work/waterhouse_team/miniconda2/pkgs/cairo-1.16.0-hfb77d84_1002
appears to be corrupted. The path 'lib/cairo/libcairo-trace.a'
specified in the package manifest cannot be found.
CondaVerificationError: The package for cairo located at /work/waterhouse_team/miniconda2/pkgs/cairo-1.16.0-hfb77d84_1002
appears to be corrupted. The path 'lib/libcairo-gobject.a'
specified in the package manifest cannot be found.
CondaVerificationError: The package for cairo located at /work/waterhouse_team/miniconda2/pkgs/cairo-1.16.0-hfb77d84_1002
appears to be corrupted. The path 'lib/libcairo-script-interpreter.a'
specified in the package manifest cannot be found.
CondaVerificationError: The package for cairo located at /work/waterhouse_team/miniconda2/pkgs/cairo-1.16.0-hfb77d84_1002
appears to be corrupted. The path 'lib/libcairo.a'
specified in the package manifest cannot be found.
CondaVerificationError: The package for cairo located at /work/waterhouse_team/miniconda2/pkgs/cairo-1.16.0-hfb77d84_1002
appears to be corrupted. The path 'share/gtk-doc/html/cairo/cairo-Paths.html'
specified in the package manifest cannot be found.
CondaVerificationError: The package for cairo located at /work/waterhouse_team/miniconda2/pkgs/cairo-1.16.0-hfb77d84_1002
appears to be corrupted. The path 'share/gtk-doc/html/cairo/cairo-cairo-pattern-t.html'
specified in the package manifest cannot be found.
CondaVerificationError: The package for cairo located at /work/waterhouse_team/miniconda2/pkgs/cairo-1.16.0-hfb77d84_1002
appears to be corrupted. The path 'share/gtk-doc/html/cairo/cairo-cairo-surface-t.html'
specified in the package manifest cannot be found.
CondaVerificationError: The package for cairo located at /work/waterhouse_team/miniconda2/pkgs/cairo-1.16.0-hfb77d84_1002
appears to be corrupted. The path 'share/gtk-doc/html/cairo/cairo-cairo-t.html'
specified in the package manifest cannot be found.
SafetyError: The package for cairo located at /work/waterhouse_team/miniconda2/pkgs/cairo-1.16.0-hfb77d84_1002
appears to be corrupted. The path 'share/gtk-doc/html/cairo/cairo-text.html'
has an incorrect size.
reported size: 80208 bytes
actual size: 0 bytes
CondaVerificationError: The package for cairo located at /work/waterhouse_team/miniconda2/pkgs/cairo-1.16.0-hfb77d84_1002
appears to be corrupted. The path 'share/gtk-doc/html/cairo/index-all.html'
specified in the package manifest cannot be found.
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'lib/site_perl/5.26.2/HTTP/Config.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'man/man3/LWP::Authen::Ntlm.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-package-stash-0.38-pl526hf484d3e_1, bioconda::perl-sub-exporter-0.987-pl526_2
path: 'man/man3/Sub::Exporter::Util.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-net-http-6.19-pl526_0
path: 'man/man3/Net::HTTP::NB.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-html-parser-3.72-pl526h6bb024c_5, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'man/man3/HTML::TokeParser.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-sub-install-0.928-pl526_2, bioconda::perl-package-stash-0.38-pl526hf484d3e_1
path: 'man/man3/Sub::Install.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-cookies-6.04-pl526_0
path: 'lib/site_perl/5.26.2/HTTP/Cookies/Netscape.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/Heuristic.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-net-http-6.19-pl526_0
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/Net/HTTP/.packlist'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-package-stash-0.38-pl526hf484d3e_1, bioconda::perl-sub-exporter-0.987-pl526_2
path: 'man/man3/Sub::Exporter::Cookbook.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/ldapi.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/ssh.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/_server.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Hungarian.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'bin/lwp-request'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/RobotUA.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'man/man3/LWP::MemberMixin.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-www-robotrules-6.02-pl526_3
path: 'lib/site_perl/5.26.2/WWW/RobotRules.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'lib/site_perl/5.26.2/HTTP/Headers/Util.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/TigrinyaEritrean.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-html-parser-3.72-pl526h6bb024c_5, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/HTML/Parser.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/urn/isbn.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Gedeo.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-negotiate-6.01-pl526_3
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/HTTP/Negotiate/.packlist'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/gopher.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-package-stash-0.38-pl526hf484d3e_1, bioconda::perl-sub-exporter-0.987-pl526_2
path: 'lib/site_perl/5.26.2/Sub/Exporter.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'man/man1/lwp-mirror.1'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-net-http-6.19-pl526_0
path: 'man/man3/Net::HTTP::Methods.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'man/man3/HTTP::Headers::ETag.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/_userpass.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'bin/lwp-download'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-sub-install-0.928-pl526_2, bioconda::perl-package-stash-0.38-pl526hf484d3e_1
path: 'lib/site_perl/5.26.2/Sub/Install.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-daemon-6.01-pl526_1
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/HTTP/Daemon/.packlist'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-params-util-1.07-pl526h6bb024c_4, bioconda::perl-package-stash-0.38-pl526hf484d3e_1
path: 'man/man3/Params::Util.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'lib/site_perl/5.26.2/HTTP/Request/Common.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'man/man3/HTTP::Response.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-http-date-6.02-pl526_3, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/HTTP/Date.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-daemon-6.01-pl526_1
path: 'lib/site_perl/5.26.2/HTTP/Daemon.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-html-parser-3.72-pl526h6bb024c_5, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'man/man3/HTML::HeadParser.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'man/man3/HTTP::Headers::Auth.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-http-date-6.02-pl526_3, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'man/man3/HTTP::Date.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/Simple.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Parse.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Czech.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/Protocol/mailto.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'man/man3/URI::file.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/file/FAT.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/rtsp.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'man/man1/lwp-request.1'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/_query.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-data-optlist-0.110-pl526_2, bioconda::perl-package-stash-0.38-pl526hf484d3e_1
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/Data/OptList/.packlist'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-net-http-6.19-pl526_0
path: 'man/man3/Net::HTTPS.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-cookies-6.04-pl526_0
path: 'man/man3/HTTP::Cookies::Netscape.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/_punycode.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-try-tiny-0.30-pl526_1, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/Try/Tiny.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'man/man3/LWP::RobotUA.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/Protocol/gopher.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-daemon-6.01-pl526_1
path: 'man/man3/HTTP::Daemon.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'man/man3/URI::WithBase.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'man/man3/LWP.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/ftp.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/ldap.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Russian_cp1251.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/mailto.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-net-http-6.19-pl526_0
path: 'man/man3/Net::HTTP.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'man/man3/LWP::Debug.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/file/Unix.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'lib/site_perl/5.26.2/HTTP/Response.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Brazilian.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'man/man3/LWP::UserAgent.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/ConnCache.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/Protocol/nogo.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/rsync.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'man/man3/LWP::Simple.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Finnish.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/_foreign.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-io-html-1.001-pl526_2, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'man/man3/IO::HTML.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'bin/lwp-mirror'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Afar.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-cookies-6.04-pl526_0
path: 'man/man3/HTTP::Cookies::Microsoft.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/WithBase.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/pop.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-data-optlist-0.110-pl526_2, bioconda::perl-package-stash-0.38-pl526hf484d3e_1
path: 'man/man3/Data::OptList.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/https.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/_login.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-html-parser-3.72-pl526h6bb024c_5, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/HTML/Entities.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/MemberMixin.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'lib/site_perl/5.26.2/HTTP/Headers.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Somali.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'man/man3/HTTP::Headers::Util.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Austrian.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/Protocol/loopback.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Italian.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'man/man3/URI::data.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-html-parser-3.72-pl526h6bb024c_5, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'man/man3/HTML::Filter.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/DebugFile.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-net-http-6.19-pl526_0
path: 'lib/site_perl/5.26.2/Net/HTTP/NB.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/Protocol/nntp.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/URI/.packlist'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-try-tiny-0.30-pl526_1, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/Try/Tiny/.packlist'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Oromo.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/Date/Parse/.packlist'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/file/Base.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Chinese.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/news.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/URL.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/file/Mac.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-package-stash-0.38-pl526hf484d3e_1, bioconda::perl-sub-exporter-0.987-pl526_2
path: 'lib/site_perl/5.26.2/Sub/Exporter/Util.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/_ldap.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-package-stash-0.38-pl526hf484d3e_1, bioconda::perl-sub-exporter-0.987-pl526_2
path: 'man/man3/Sub::Exporter::Tutorial.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-net-http-6.19-pl526_0
path: 'lib/site_perl/5.26.2/Net/HTTP/Methods.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/rlogin.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-params-util-1.07-pl526h6bb024c_4, bioconda::perl-package-stash-0.38-pl526hf484d3e_1
path: 'lib/site_perl/5.26.2/Params/Util.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Turkish.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-net-http-6.19-pl526_0
path: 'lib/site_perl/5.26.2/Net/HTTPS.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-html-tagset-3.20-pl526_3, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/HTML/Tagset/.packlist'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-algorithm-diff-1.1903-pl526_2, bioconda::perl-algorithm-munkres-0.08-pl526_1, bioconda::perl-appconfig-1.71-pl526_1, bioconda::perl-capture-tiny-0.48-pl526_0, bioconda::perl-class-data-inheritable-0.08-pl526_1, bioconda::perl-class-inspector-1.34-pl526_0, bioconda::perl-convert-binary-c-0.78-pl526h6bb024c_3, bioconda::perl-crypt-rc4-2.02-pl526_1, bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-devel-stacktrace-2.04-pl526_0, bioconda::perl-digest-hmac-1.03-pl526_3, bioconda::perl-digest-md5-2.55-pl526_0, bioconda::perl-digest-perl-md5-1.9-pl526_1, bioconda::perl-email-date-format-1.005-pl526_2, bioconda::perl-extutils-makemaker-7.36-pl526_1, bioconda::perl-file-slurp-tiny-0.004-pl526_1, bioconda::perl-file-sort-1.01-pl526_2, bioconda::perl-font-afm-1.20-pl526_2, bioconda::perl-getopt-long-2.50-pl526_1, bioconda::perl-graph-0.9704-pl526_1, bioconda::perl-html-entities-numbered-0.04-pl526_1, bioconda::perl-html-tagset-3.20-pl526_3, bioconda::perl-io-html-1.001-pl526_2, bioconda::perl-io-sessiondata-1.03-pl526_1, bioconda::perl-io-string-1.08-pl526_3, bioconda::perl-io-stringy-2.111-pl526_1, bioconda::perl-io-tty-1.12-pl526_1, bioconda::perl-jcode-2.07-pl526_2, bioconda::perl-math-cdf-0.1-pl526h14c3975_5, bioconda::perl-math-random-0.72-pl526h14c3975_2, bioconda::perl-mime-types-2.17-pl526_0, bioconda::perl-ole-storage_lite-0.19-pl526_3, bioconda::perl-postscript-0.06-pl526_2, bioconda::perl-set-scalar-1.29-pl526_2, bioconda::perl-sort-naturally-1.03-pl526_2, bioconda::perl-sub-exporter-progressive-0.001013-pl526_0, bioconda::perl-sub-uplevel-0.2800-pl526h14c3975_2, bioconda::perl-svg-2.84-pl526_0, bioconda::perl-task-weaken-1.06-pl526_0, bioconda::perl-test-deep-1.128-pl526_1, bioconda::perl-test-leaktrace-0.16-pl526h14c3975_2, bioconda::perl-timedate-2.30-pl526_1, bioconda::perl-unicode-map-0.112-pl526h6bb024c_3, bioconda::perl-xml-regexp-0.04-pl526_2, bioconda::perl-xml-writer-0.625-pl526_2, bioconda::perl-xml-xpathengine-0.14-pl526_2, bioconda::perl-db-file-1.852-pl526h14c3975_0, bioconda::perl-libxml-perl-0.08-pl526_2, bioconda::perl-math-spline-0.02-pl526_2, bioconda::perl-role-tiny-2.000008-pl526_0, bioconda::perl-xml-filter-buffertext-1.01-pl526_2, bioconda::perl-json-4.02-pl526_0
path: 'lib/5.26.2/x86_64-linux-thread-multi/perllocal.pod'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'man/man3/HTTP::Request.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-mediatypes-6.04-pl526_0, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/LWP/MediaTypes.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'man/man3/Date::Language.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Format.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-html-parser-3.72-pl526h6bb024c_5, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/HTML/TokeParser.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/snews.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'man/man3/LWP::ConnCache.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/urn/oid.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-io-html-1.001-pl526_2, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/IO/HTML/.packlist'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'man/man3/URI::QueryParam.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-www-robotrules-6.02-pl526_3
path: 'lib/site_perl/5.26.2/WWW/RobotRules/AnyDBM_File.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/German.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/Authen/Basic.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Tigrinya.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/mms.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-mediatypes-6.04-pl526_0, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/LWP/MediaTypes/.packlist'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'man/man3/HTTP::Status.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/Protocol.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/data.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/tn3270.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/Protocol/http.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/rtspu.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-html-parser-3.72-pl526h6bb024c_5, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'man/man3/HTML::LinkExtor.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/sftp.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/file.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-file-listing-6.04-pl526_1
path: 'lib/site_perl/5.26.2/File/Listing.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Russian.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-cookies-6.04-pl526_0
path: 'man/man3/HTTP::Cookies.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'lib/site_perl/5.26.2/HTTP/Request.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-package-stash-0.38-pl526hf484d3e_1, bioconda::perl-sub-exporter-0.987-pl526_2
path: 'man/man3/Sub::Exporter.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-mediatypes-6.04-pl526_0, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'man/man3/LWP::MediaTypes.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'lib/site_perl/5.26.2/HTTP/Headers/Auth.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-html-parser-3.72-pl526h6bb024c_5, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'man/man3/HTML::Entities.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/ldaps.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'man/man3/URI::ldap.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-html-parser-3.72-pl526h6bb024c_5, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/HTML/LinkExtor.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/nntp.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'lib/site_perl/5.26.2/HTTP/Headers/ETag.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'man/man3/HTTP::Headers.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'man/man3/URI::Split.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/Authen/Ntlm.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-cookies-6.04-pl526_0
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/HTTP/Cookies/.packlist'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/QueryParam.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-io-html-1.001-pl526_2, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/IO/HTML.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'lib/site_perl/5.26.2/HTTP/Status.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/Protocol/ftp.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'man/man1/lwp-dump.1'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-html-parser-3.72-pl526h6bb024c_5, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'man/man3/HTML::Parser.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/Authen/Digest.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-package-stash-0.38-pl526hf484d3e_1, bioconda::perl-sub-exporter-0.987-pl526_2
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/Sub/Exporter/.packlist'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'man/man3/Date::Parse.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-html-tagset-3.20-pl526_3, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'man/man3/HTML::Tagset.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Bulgarian.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Dutch.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/file/OS2.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Icelandic.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-file-listing-6.04-pl526_1
path: 'man/man3/File::Listing.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-file-listing-6.04-pl526_1
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/File/Listing/.packlist'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-html-parser-3.72-pl526h6bb024c_5, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/HTML/Filter.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'man/man3/URI::Escape.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/IRI.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Greek.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/http.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'man/man3/Date::Format.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-package-stash-0.38-pl526hf484d3e_1, bioconda::perl-sub-exporter-0.987-pl526_2
path: 'lib/site_perl/5.26.2/Sub/Exporter/Tutorial.pod'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'man/man3/Date::Language::Hungarian.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-mediatypes-6.04-pl526_0, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/LWP/media.types'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-html-parser-3.72-pl526h6bb024c_5, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/HTML/Parser/Parser.so'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/_idna.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Swedish.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'bin/lwp-dump'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/sip.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/file/QNX.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/file/Win32.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'man/man3/Time::Zone.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/_generic.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Spanish.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'man/man3/HTTP::Config.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-http-date-6.02-pl526_3, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/HTTP/Date/.packlist'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-html-parser-3.72-pl526h6bb024c_5, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/HTML/PullParser.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-negotiate-6.01-pl526_3
path: 'man/man3/HTTP::Negotiate.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-html-parser-3.72-pl526h6bb024c_5, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/HTML/HeadParser.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/Debug.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-www-robotrules-6.02-pl526_3
path: 'man/man3/WWW::RobotRules::AnyDBM_File.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Danish.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Time/Zone.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'man/man3/HTTP::Message.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'man/man1/lwp-download.1'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/urn.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/TigrinyaEthiopian.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-negotiate-6.01-pl526_3
path: 'lib/site_perl/5.26.2/HTTP/Negotiate.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/telnet.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/Split.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-html-parser-3.72-pl526h6bb024c_5, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/HTML/Parser/.packlist'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/sips.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/UserAgent.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Norwegian.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/Protocol/cpan.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-net-http-6.19-pl526_0
path: 'lib/site_perl/5.26.2/Net/HTTP.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-html-parser-3.72-pl526h6bb024c_5, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'man/man3/HTML::PullParser.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'man/man3/Date::Language::Bulgarian.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'lib/site_perl/5.26.2/HTTP/Message.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-data-optlist-0.110-pl526_2, bioconda::perl-package-stash-0.38-pl526hf484d3e_1
path: 'lib/site_perl/5.26.2/Data/OptList.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-package-stash-0.38-pl526hf484d3e_1, bioconda::perl-sub-exporter-0.987-pl526_2
path: 'lib/site_perl/5.26.2/Sub/Exporter/Cookbook.pod'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'man/man3/URI::_punycode.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'man/man3/URI::URL.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-sub-install-0.928-pl526_2, bioconda::perl-package-stash-0.38-pl526hf484d3e_1
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/Sub/Install/.packlist'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/English.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/Protocol/file.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'man/man3/LWP::Protocol.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'man/man3/URI::Heuristic.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-cookies-6.04-pl526_0
path: 'lib/site_perl/5.26.2/HTTP/Cookies/Microsoft.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-www-robotrules-6.02-pl526_3
path: 'man/man3/WWW::RobotRules.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-www-robotrules-6.02-pl526_3
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/WWW/RobotRules/.packlist'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/French.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-params-util-1.07-pl526h6bb024c_4, bioconda::perl-package-stash-0.38-pl526hf484d3e_1
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/Params/Util/.packlist'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/Escape.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-cookies-6.04-pl526_0
path: 'lib/site_perl/5.26.2/HTTP/Cookies.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'lib/site_perl/5.26.2/x86_64-linux-thread-multi/auto/HTTP/Message/.packlist'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Russian_koi8r.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'lib/site_perl/5.26.2/URI/_segment.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-html-tagset-3.20-pl526_3, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'lib/site_perl/5.26.2/HTML/Tagset.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-try-tiny-0.30-pl526_1, bioconda::perl-lwp-simple-6.15-pl526h470a237_4
path: 'man/man3/Try::Tiny.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Romanian.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-http-message-6.18-pl526_0
path: 'man/man3/HTTP::Request::Common.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Amharic.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Chinese_GB.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-uri-1.76-pl526_0
path: 'man/man3/URI.3'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-lwp-simple-6.15-pl526h470a237_4, bioconda::perl-libwww-perl-6.39-pl526_0
path: 'lib/site_perl/5.26.2/LWP/Protocol/data.pm'
ClobberError: This transaction has incompatible packages due to a shared path.
packages: bioconda::perl-date-format-2.30-pl526_2, bioconda::perl-timedate-2.30-pl526_1
path: 'lib/site_perl/5.26.2/Date/Language/Sidama.pm'
(agat) lorencm@lyra04:~>
What did I miss?
Thank you in advance
By updating conda I meant: conda update -n base -c defaults conda
From your result we can see it is not related to python3. What we can do is to check the channel priorities. Could you show the ‘.condarc’ file?
Another way will just be to reinstall conda (miniconda3 or anaconda3), but you will loose all conda env you already have. Of you have just a few it could worth it.
Did you fix it at the end?
Hi @Juke34, I tried
conda install agat
but I got:What did I miss?
Thank you in advance,
Michal