search

bioconda / bioconda-recipes

Conda recipes for the bioconda channel.
https://bioconda.github.io
MIT License
1.65k stars 3.29k forks source link

Missing Biocontainer builds for Biopython 1.71 to 1.76 #21085

Open stekaz opened 4 years ago

stekaz commented 4 years ago

Hi,

I have a conda install of biopython that works brilliantly (I'm using biopython=1.76=py38h516909a_0). However, I did not have any luck finding the corresponding biocontainer:

$ docker pull quay.io/biocontainers/biopython:1.76--py38h516909a_0
Error response from daemon: manifest for quay.io/biocontainers/biopython:1.76--py38h516909a_0 not found

My guess is that the container is not being built automatically for some reason or another. It would be great to work out what's gone wrong and get these builds running again. Please let me know if there's anything I can do to help - thanks!

croth1 commented 4 years ago

I think this is due to biopython having been moved to conda-forge since version 1.70. See also: https://anaconda.org/search?q=biopython

stekaz commented 4 years ago

Thanks @croth1 - you are correct - it was deprecated from bioconda: #5292