bioconda / bioconda-recipes

Conda recipes for the bioconda channel.
https://bioconda.github.io
MIT License
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Update vclust to 1.2.8 #51692

Closed agudys closed 3 days ago

agudys commented 4 days ago

Update vclust to 1.2.8

Please read the guidelines for Bioconda recipes before opening a pull request (PR).

General instructions

Instructions for avoiding API, ABI, and CLI breakage issues

Conda is able to record and lock (a.k.a. pin) dependency versions used at build time of other recipes. This way, one can avoid that expectations of a downstream recipe with regards to API, ABI, or CLI are violated by later changes in the recipe. If not already present in the meta.yaml, make sure to specify run_exports (see here for the rationale and comprehensive explanation). Add a run_exports section like this:

build:
  run_exports:
    - ...

with ... being one of:

Case run_exports statement
semantic versioning {{ pin_subpackage("myrecipe", max_pin="x") }}
semantic versioning (0.x.x) {{ pin_subpackage("myrecipe", max_pin="x.x") }}
known breakage in minor versions {{ pin_subpackage("myrecipe", max_pin="x.x") }} (in such a case, please add a note that shortly mentions your evidence for that)
known breakage in patch versions {{ pin_subpackage("myrecipe", max_pin="x.x.x") }} (in such a case, please add a note that shortly mentions your evidence for that)
calendar versioning {{ pin_subpackage("myrecipe", max_pin=None) }}

while replacing "myrecipe" with either name if a name|lower variable is defined in your recipe or with the lowercase name of the package in quotes.

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coderabbitai[bot] commented 4 days ago
πŸ“ Walkthrough
πŸ“ Walkthrough
πŸ“ Walkthrough
πŸ“ Walkthrough
πŸ“ Walkthrough ## Walkthrough The changes in this pull request involve updates to the `meta.yaml` file for the `vclust` package. The package version has been incremented from "1.2.7" to "1.2.8". Specific platform identifiers have replaced generic system identifiers, now including `manylinux2014_x86_64`, `manylinux2014_aarch64`, `macosx_10_9_x86_64`, and `macosx_11_0_arm64`. New `site` variables have been introduced, providing URLs for the wheel files for each platform, and the SHA256 checksums have been updated accordingly. The build process has shifted from manual directory creation and file copying to using a pip install command sourced from the new `site` URLs. Additionally, the command for running the tool has changed from `vclust.py` to `vclust`, indicating a modification in the invocation method. ## Possibly related PRs - **#50007**: This PR is directly related as it also modifies the `meta.yaml` file for the `vclust` package, updating the version and system specifications, similar to the changes made in the main PR. ## Suggested labels `autobump`, `new version` ## Suggested reviewers - martin-g

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agudys commented 3 days ago

@BiocondaBot please add label