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bioconda / bioconda-recipes

Conda recipes for the bioconda channel.
https://bioconda.github.io
MIT License
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Package request: OGRI (Overall Genome Relatedness Indices) #51707

Open tuefue opened 3 days ago

tuefue commented 3 days ago

Please make package for OGRI: https://gitlab.pasteur.fr/GIPhy/OGRI

Thanks.

tuefue commented 1 day ago

My first try:

meta.yaml

{% set version = "1.2" %}

package:
  name: ogri
  version: {{ version }}

source:
  url: https://gitlab.pasteur.fr/GIPhy/OGRI/-/archive/{{ version }}/OGRI-{{ version }}.tar.gz
  sha256: 1d9b198c841948b34c643c81fce70e60f24f8eda3aea5b4a1ed1ebe9ecff0a48

build:
  number: 0

requirements:
  run:
    - gawk >4.0.0
    - prodigal >=2.6.3
    - blast >=2.12.0

test:
  commands:
    - OGRI_B.sh -h

about:
  home: https://gitlab.pasteur.fr/GIPhy/OGRI
  summary: Overall Genome Relatedness Indices
  license: AGPL

build.sh

#!/bin/bash

mkdir -p $PREFIX/bin
cp OGRI_B.sh $PREFIX/bin

What do you think?