bioconda / bioconda-recipes

Conda recipes for the bioconda channel.
https://bioconda.github.io
MIT License
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Update zol to 1.5.1 #51772

Closed BiocondaBot closed 2 days ago

BiocondaBot commented 2 days ago

Update zol: 1.5.01.5.1

install with bioconda Conda

Info Link or Description
Recipe recipes/zol (click to view/edit other files)
Summary zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters.
Home https://github.com/Kalan-Lab/zol
Releases https://github.com/Kalan-Lab/zol/tags
Recipe Maintainer(s) @raufs
Author @Kalan-Lab

This pull request was automatically generated (see docs).

coderabbitai[bot] commented 2 days ago
📝 Walkthrough ## Walkthrough The pull request involves an update to the `meta.yaml` file for the `zol` package. The version has been incremented from `1.5.0` to `1.5.1`. Correspondingly, the source URL has been updated to reflect the new version's tarball located at `https://github.com/Kalan-Lab/zol/archive/refs/tags/v1.5.1.tar.gz`. Additionally, the SHA256 checksum for the source archive has been modified from `e1d0d090a08a26d2ecbb958d398dc47df94ffbaa034265086c7084d1e88cfb2d` to `fdfd608d78bb62bb3068f6bfdbddfe850c4c2ed90b3ffd6d7817379faa01976d`. No other modifications to the structure, requirements, or other sections of the `meta.yaml` file have been made. ## Possibly related PRs - **#51673**: This PR updates the `zol` package from version `1.4.12` to `1.5.0`, which is directly related to the main PR that updates the `zol` package from `1.5.0` to `1.5.1`. Both PRs involve version updates and changes to the `meta.yaml` file for the same package. ## Suggested reviewers - raufS

📜 Recent review details **Configuration used: CodeRabbit UI** **Review profile: CHILL**
📥 Commits Files that changed from the base of the PR and between 2914659a8cb171f35ddda3cf9db533cbc80cb4cb and e6a10a5d0a8008242e40fdb62872dd979e5d5eac.
📒 Files selected for processing (1) * recipes/zol/meta.yaml (1 hunks)
🔇 Additional comments (3)
recipes/zol/meta.yaml (3) `2-2`: **LGTM: Version update looks correct.** The version bump from 1.5.0 to 1.5.1 matches the PR objectives. --- Line range hint `19-61`: **Verify if dependency updates are needed.** While this is a patch version update (1.5.0 -> 1.5.1), it would be good to verify if any dependency versions need to be updated by checking the release notes.
✅ Verification successful Based on the release notes from v1.5.1, I can generate the final response: **No dependency updates required for v1.5.1** The release notes for v1.5.1 indicate only minor updates to the `cgcg` functionality and documentation changes. There are no mentions of dependency version changes or requirements. The changes are focused on: - Correcting consensus directionality for ortholog groups - Adding graph control options - Docker image building files updates - README updates
🏁 Scripts executed The following scripts were executed for the analysis: Script: ```shell #!/bin/bash # Description: Check for any dependency changes in the release notes # Expected: No breaking changes or dependency updates in patch version # Fetch the release notes for v1.5.1 gh release view v1.5.1 --repo Kalan-Lab/zol ``` Length of output: 1207
🧰 Tools
🪛 yamllint [error] 1-1: syntax error: found character '%' that cannot start any token (syntax)
--- `10-10`: **Verify the SHA256 checksum.** Let's verify that the SHA256 checksum matches the source tarball.

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