Closed Estel-Kitsune closed 6 years ago
Thanks for trying epic and reporting issues.
Try the latest version please. Epic is not stable yet and each upgrade fixes bugs :)
pip install -U bioepic
It claims that there were no reads in the treatment file. See if that persists after upgrading, or if the file is empty.
There was a problem with the BED files (not on your repo, it was my mistake). I've updated to version 0.1.1. and it seems to work fine with the example dataset. Thanks! I'm closing this issue. PS: When you have time, could you document the commands that are needed to run epic after cloning the git repository?
Will do. Reopening as a reminder 👍
Hi,
I'm using SICER in one of my projects, and I wanted to give epic a try. I'm using epic 0.0.6 (conda install). I downloaded the test.bed and control.bed files.
epic --treatment test.bed --control control.bed
And I'm getting the following error message:
/Estelle