epic-merge fails to run

biocore-ntnu / epic

(DEPRECATED) epic: diffuse domain ChIP-Seq caller based on SICER

http://bioepic.readthedocs.io

MIT License

31 stars 6 forks source link

Closed nw11 closed 6 years ago

nw11 commented 6 years ago

Doesn't include a shebang line. If this is done (e.g. copying the way it is done in the epic program) - then I can't seem to avoid this error:

File "/home/n/Apps/anaconda2/bin/epic-merge", line 73, in from math import gcd ImportError: cannot import name gcd

endrebak commented 6 years ago

I suspect this is a Python 2 related bug. I’ll start fixing it now :)

endrebak commented 6 years ago

Thanks for reporting btw!

endrebak commented 6 years ago

github automatically closed this as I wrote "fix #66" in the commit message (cool feature). Please tell me whether it worked or not :)

nw11 commented 6 years ago

Sorry for the late reply, but just to say this works fine, thanks very much for the fix.