Allow samtools filter flags + quality threshold on the command line?

biocore-ntnu / epic

(DEPRECATED) epic: diffuse domain ChIP-Seq caller based on SICER

http://bioepic.readthedocs.io

MIT License

31 stars 6 forks source link

Closed endrebak closed 8 years ago

endrebak commented 8 years ago

Would allowing users to enter samtools flags or a fasta min quality threshold on the command line be helpful?

Opinions welcome!

endrebak commented 8 years ago

Closed since removing bam support.