search

biocore / American-Gut

American Gut open-access data and IPython notebooks
Other
108 stars 81 forks source link

test_select_gamma.py fails with ImportError #71

Closed ElDeveloper closed 8 years ago

ElDeveloper commented 10 years ago

Looks like test_select_gamma.py tries to import from select_gamma.py which only exists under the scripts folder. This has to be changed such that the library code that's being tested exists under the americangut module. Additionally the test code should not import select_gamma as it is currently doing it, it should import:

from americangut.select_gamma import function_name

@amnona do you think you could take care of this?

jwdebelius commented 8 years ago

This bloom filtering; updated in favor of processing notebooks, and to change in the future in favor of new processing.