(1/1) Invalid value for '--i-table': 'kelp-biom.qza' is not a QIIME 2 Artifact (.qza) - Githubissues

biocore / DEICODE

Robust Aitchison PCA from sparse count data

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(1/1) Invalid value for '--i-table': 'kelp-biom.qza' is not a QIIME 2 Artifact (.qza) #66

Closed scleractinia closed 8 months ago

scleractinia commented 8 months ago

Hi All,

I generated my biom table with qiime version (qiime2-amplicon-2023.9), and then launched qiime2-2020.6 to run deicode, and I am encountering this error: (1/1) Invalid value for '--i-table': 'kelp-biom.qza' is not a QIIME 2 Artifact (.qza)

I am guessing it's version incompatibilities, but am unsure of how to get around this without running the whole pipeline through the older version again.

Attached is my table that I am trying to run deicode with. kelp-deblur-sepp-gg-only-noUnassigned-noEukaryota-noMito-noChlor-noDbltns-onlyKelp-min1500-biom.qza.zip

cameronmartino commented 8 months ago

Hi @scleractinia,

Thanks for reaching out. Please use Gemelli's RPCA function, it should solve the problem.

Thanks,

Cameron