Closed wasade closed 3 months ago
A couple of other API additions that would be convenient are if:
If the three of these were implemented, that would move all of the interesting logic in my https://github.com/qiime2/q2-feature-table/pull/277 to the biom.Table
API.
I think it should be possible to do all of this without biom.Table.partition
breaking changes - all just additions with defaults set to match current behavior.
These are excellent suggestions, and agree it can be done w/o breaking the API. Thanks!
...to allow for calling
remove_empty
and for removing samples which do not fall into a bin. See https://github.com/qiime2/q2-feature-table/pull/277#discussion_r1277792071cc @gregcaporaso