Closed UmaJan closed 7 months ago
Hi @UmaJan, can you confirm what version of python and share the full output you're receiving?
I am using 3.1 and am getting these messages
error: command 'gcc' failed: No such file or directory [end of output]
note: This error originates from a subprocess, and is likely not a problem with pip. ERROR: Failed building wheel for biom-format Failed to build biom-format ERROR: Could not build wheels for biom-format, which is required to install pyproject.toml-based projects
Maybe it should be documented, but looks like the recipe expects you to have a valid compiler installed.
Can you retry after installing separately the usual compiler environment: gcc, g++, make
Hi @UmaJan, we have not verified support for Python 3.12 yet, and also do not currently provide pre-built wheels for Python 3.12. You can find the versions we test against here.
Are you required to use Python 3.12 or can you instead use 3.11?
I am using 3.6.8 currently I will try with some of the tested versions
Okay, but the screenshots show Python 3.12. We dropped support for 3.6 a bit ago. Please let us know how things proceed!
know
I switched to pyenv and used a 3.7 shell and it works, thanks!
That's great! Sorry for the issues and glad it's working now!
Attempting installation on cluster using pip install results in "failure to build wheel" messag repeatedly.