biocore / emp

Code repository of the Earth Microbiome Project.
http://www.earthmicrobiome.org
BSD 3-Clause "New" or "Revised" License
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Sequences dropped by split libraries #59

Open antgonza opened 8 years ago

antgonza commented 8 years ago

Check drop of sequences at the split library stage and if that has any correlation with env or something else.

The easiest that comes to mind to do this is to change params in split libraries to only discard sequences based on barcode and then compare the numbers per sample ...