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biocore / gneiss

compositional data analysis toolbox
https://biocore.github.io/gneiss/
BSD 3-Clause "New" or "Revised" License
55 stars 28 forks source link

Sparse ilr #250

Closed mortonjt closed 6 years ago

mortonjt commented 6 years ago

This creates a sparse representation of an ilr basis. This will ultimately enable scalability of very high dimensional datasets.

This will replace the efforts in #8

coveralls commented 6 years ago

Coverage Status

Coverage increased (+0.06%) to 96.634% when pulling b8210f1df35dfb073b870352d3dcfac8e6423a77 on mortonjt:sparse-ilr into 5d724fc8d467acf72ec646cbfe63c65863da2488 on biocore:master.

mortonjt commented 6 years ago

We have quite a few outstanding PRs, so let's merge this in once travis completes.