Support new metatranscriptomic columns

biocore / metagenomics_pooling_notebook

Jupyter notebooks to assist with sample processing

MIT License

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Support new metatranscriptomic columns #191

Closed charles-cowart closed 3 months ago

charles-cowart commented 3 months ago

Support new metatranscriptomic columns. Support legacy sample-sheets using 'Sample_Well' instead of 'well_id_384' in seqpro better. Accurate sample inputs for seqpro added to test correctness of multiple 'count' columns. A small test to run seqpro against the above inputs and compare them against the known expected output is forthcoming.

charles-cowart commented 3 months ago

@antgonza Ready for review!