biocore / metagenomics_pooling_notebook

Jupyter notebooks to assist with sample processing
MIT License
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Bcl convert #43

Closed charles-cowart closed 2 years ago

charles-cowart commented 2 years ago

Modified some code per Yoshiki's instruction to collect stats information from bcl-convert metadata. seqpro should now be able to generate prep-files from bcl-converted fastq files as well as bcl2fastq-generated ones.

I did not yet add a sample bcl-convert stats file to the unittests. This should probably be done.