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biocore / metagenomics_pooling_notebook

Jupyter notebooks to assist with sample processing
MIT License
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Migrated Wetlab-extensions into metapool package #79

Closed charles-cowart closed 2 years ago

charles-cowart commented 2 years ago

Migrated Wetlab-created extensions from metagenomics_pipeline_MiniPiconorm.ipynb into metapool package. Added unittests.

charles-cowart commented 2 years ago

WIP. Extending use-cases to include more than a single lane-number, and random lane-number ordering. Current Stats.json file does not have an overlap of IndexSequences between Lane numbers. Preparing an additional Stats.json file example that will have this overlap.

charles-cowart commented 2 years ago

@antgonza I reversed the troubling functions and wrote replacements. Please feel free to review at your convenience. Ty!

charles-cowart commented 2 years ago

@antgonza Ty for the review! Please feel free to review the most recent changes at your convenience.