biocore / mg-scripts

Knight Lab internal Metagenomic processing scripts for demultiplexing, QC and host removal
BSD 3-Clause "New" or "Revised" License
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added get_sample_names() method that's replicate compliant #143

Closed charles-cowart closed 2 months ago

charles-cowart commented 2 months ago

Added a method to Pipeline class to return a set of sample-names w/out the well-ids that would be prepended to sample-names if the sheet contains replicates.

coveralls commented 2 months ago

Pull Request Test Coverage Report for Build 9573777770

Details


Changes Missing Coverage Covered Lines Changed/Added Lines %
sequence_processing_pipeline/Pipeline.py 11 14 78.57%
<!-- Total: 17 20 85.0% -->
Totals Coverage Status
Change from base Build 9516445169: 0.007%
Covered Lines: 2060
Relevant Lines: 2351

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