biocore / mg-scripts

Knight Lab internal Metagenomic processing scripts for demultiplexing, QC and host removal
BSD 3-Clause "New" or "Revised" License
1 stars 5 forks source link

WIP: Seqpro refactor #148

Open charles-cowart opened 1 month ago

charles-cowart commented 1 month ago

Migrate ConvertJob to use Jinja2 template as part of refactoring GenPrepFileJob to parallelize prep-file generation.

coveralls commented 1 month ago

Pull Request Test Coverage Report for Build 10086981019

Details


Changes Missing Coverage Covered Lines Changed/Added Lines %
sequence_processing_pipeline/ConvertJob.py 25 29 86.21%
<!-- Total: 29 33 87.88% -->
Totals Coverage Status
Change from base Build 9884255257: -0.06%
Covered Lines: 2065
Relevant Lines: 2357

💛 - Coveralls