biocore / mg-scripts

Knight Lab internal Metagenomic processing scripts for demultiplexing, QC and host removal
BSD 3-Clause "New" or "Revised" License
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Update get_sample_names() to filter by project #99

Closed charles-cowart closed 1 year ago

coveralls commented 1 year ago

Pull Request Test Coverage Report for Build 5194197096


Totals Coverage Status
Change from base Build 5072782504: 0.3%
Covered Lines: 1600
Relevant Lines: 1811

💛 - Coveralls
charles-cowart commented 1 year ago

@wasade @antgonza Just to provide some context for this change: get_sample_names() returns all of the sample-names in the user's sample-sheet or mapping-file, across all projects. I have a case where I need to compare the set of sample-names in a project with the set of sample-names in Qiita, and the addition of sample-names from other projects was corrupting the results. This fix addresses that issue.