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biocore / micronota

annotation pipeline for microbial genomes and metagenomes

BSD 3-Clause "New" or "Revised" License

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Closed mortonjt closed 8 years ago

mortonjt commented 8 years ago

Depends on #54.

This is definitely a work in progress

A couple of things need to be addressed before this can be merged in

[ ] Explicit handling of sam output for all searches
[x] Maintaining a list of skbio.Sequence internally to pass directly into the cache.