use snakemake and IntervalMetadata

biocore / micronota

annotation pipeline for microbial genomes and metagenomes

BSD 3-Clause "New" or "Revised" License

18 stars 10 forks source link

use snakemake and IntervalMetadata #79

Closed RNAer closed 7 years ago

coveralls commented 7 years ago

Changes Unknown when pulling 40ae1e97383647fdb880527afcd763d268555482 on RNAer:snakemake into \ on biocore:dev**.

mortonjt commented 7 years ago

Really need to upload all of the files pointed to in the config.yaml file. So we can actually understand what is going on.

I'll merge it as soon as those files get updated.

mortonjt commented 7 years ago

This looks ready to merge! Thanks!

One more thing - there is still some confusion about the file paths. It relies on the database to be installed under the home directory. Let me raise an issue for it. Sound good?

coveralls commented 7 years ago

Changes Unknown when pulling 09ae56ab86450ac7028dfb577486377a2d9bb119 on RNAer:snakemake into \ on biocore:dev**.

coveralls commented 7 years ago

Changes Unknown when pulling b5f6d8e00fa9975c4f5af9ad03863156004cc1f3 on RNAer:snakemake into \ on biocore:dev**.

coveralls commented 7 years ago

Changes Unknown when pulling b5f6d8e00fa9975c4f5af9ad03863156004cc1f3 on RNAer:snakemake into \ on biocore:dev**.