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biocore / microprot

structural annotation pipeline for microbial genomes and metagenomes
BSD 3-Clause "New" or "Revised" License
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pipeline: use DHM to keep databases in memory #61

Open tkosciol opened 7 years ago

tkosciol commented 7 years ago

we can use DHM for each job to keep databases (PDB70, UniClust30, etc.) in memory. It resulted in a significant speed-up for micronota.

tkosciol commented 4 years ago

DHM is just one of the options. other working solutions are also ok