refactor the Snakemake pipeline

biocore / microprot

structural annotation pipeline for microbial genomes and metagenomes

BSD 3-Clause "New" or "Revised" License

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Open tkosciol opened 4 years ago

tkosciol commented 4 years ago

merge the search_split_PDB and search_split_CM rules into one (with CM parameters)
consider rewriting the pipeline without Snakemake (we don't really take advantage of Snakemake capabiities)

related issues: #61