visualization the result of mmvec

biocore / mmvec

Neural networks for microbe-metabolite interaction analysis

BSD 3-Clause "New" or "Revised" License

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visualization the result of mmvec #181

Open Chauncy-Fang opened 2 months ago

Chauncy-Fang commented 2 months ago

Dear authors,

I have completely finished the analysis step according to your protocol. But I am confused how I can visualize the result without QIIME2? My QIIME virtual environment is not friendly to mmvec so I establish a separated for mmvec single. I will be much more appreciate if you could tell me how to visualize the result without QIIME2.

Best regards,

Chauncy

mortonjt commented 1 month ago

Thanks for your interest.

I'd check out the visualizations published with the original manuscript to provide some guidance on how to generate your own custom visualizations https://github.com/knightlab-analyses/multiomic-cooccurrences