This just changes the initial fastq combine rule to happen on the local node. It's nicer to the cluster because: 1. will restrict the number of simultaneous writes to the filesystem to whatever you pass to --local-cores and 2: doesn't hammer the scheduler with tiny jobs
This just changes the initial fastq combine rule to happen on the local node. It's nicer to the cluster because: 1. will restrict the number of simultaneous writes to the filesystem to whatever you pass to
--local-coresand 2: doesn't hammer the scheduler with tiny jobs