biocore / oecophylla

shotgun pipeline
MIT License
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updated humann2 install with explicit glpk version #162

Closed tanaes closed 6 years ago

tanaes commented 6 years ago

Some samples were failing sporadically on some datasets, with errors coming from certain samples that looked like:

CRITICAL ERROR: Unable to process all thread commands.
Error message returned from command for thread task 2: ...

This came from a problem with the glpk version being installed.

Explicitly specifying in the conda version recipe resolves.

tanaes commented 6 years ago

@qiyunzhu also this one?