Open gregcaporaso opened 10 years ago
Will do this after I replace UPGMA
perfect
@ebolyen, I'm going to unassign this one from you since you're focusing on the taxonomy plotting functionality now. Sound good?
Sounds good, thanks! On May 21, 2014 7:07 AM, "Greg Caporaso" notifications@github.com wrote:
@ebolyen https://github.com/ebolyen, I'm going to unassign this one from you since you're focusing on the taxonomy plotting functionality now. Sound good?
— Reply to this email directly or view it on GitHubhttps://github.com/biocore/qiime/issues/1548#issuecomment-43758492 .
@ebolyen's code for @gregcaporaso's SciPy 2014 talk (ipynb here) should be take care of this.
and if not, port
cogent.draw.dendogram
to skbio@ebolyen, would you want to work on this one?
Note there are examples of how to use the scipy version in the MSA chapter of IAB but we need to deal with the issue of overlapping/unreadable labels if we're going to use the scipy version. The issue is illustrated in the "language trees" in this section.