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biocore / qiime

Official QIIME 1 software repository. QIIME 2 (https://qiime2.org) has succeeded QIIME 1 as of January 2018.
GNU General Public License v2.0
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plot_taxa_summary no html file #2192

Closed Ros938 closed 7 years ago

Ros938 commented 7 years ago

HI there, first of all thank you for developing those useful and user friendly script! I don't have much experience with this types of analysis but I am quickly learning thanks to you! Now my question: I am running the plot_taxa_summary.py script including -c -s -d and -l options Unfortunately what I get as output is a .png a pdf. file for each of the chart type selected a .js and a .css file. I am missing the .html file where all the informations are. I am attaching a bar graph and a pie chart as an example of what I get. Thanks in advance for your time! iukxSzDGyHnyQ3NuYpQeiJqoCkCBlL.pdf ktdMlJl1ZCXSCkdbOijfzIQ0pZz8Fi.pdf

jairideout commented 7 years ago

Can you please post your question on the QIIME 1 forum? That's where we provide user support.