Unable to run script plot_rank_abundance_graph.py -i otu_table.txt -s '*' -x -f eps -v
Plot the rank-abundance curve of all samples in an OTU table:
Is there a threshold of total samples that can be run through this script ? I had a total of 95 sample ids but when I ran the script, file name assignment included all the sample names generated an error in naming the assigned PDF file.
IOError: [Errno 63] File name too long: '
When I reduced the sample number to 63 I got a data output. Have attached error output.
Unable to run script
plot_rank_abundance_graph.py -i otu_table.txt -s '*' -x -f eps -v
Plot the rank-abundance curve of all samples in an OTU table:
Is there a threshold of total samples that can be run through this script ? I had a total of 95 sample ids but when I ran the script, file name assignment included all the sample names generated an error in naming the assigned PDF file.
When I reduced the sample number to 63 I got a data output. Have attached error output.