biocore / songbird

Vanilla regression methods for microbiome differential abundance analysis
BSD 3-Clause "New" or "Revised" License
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(Temporarily) pin pandas version in the README's standalone install instructions #118

Closed fedarko closed 4 years ago

fedarko commented 4 years ago

This isn't a good long-term solution, but will temporarily save people from running into the problem discussed in #117 -- and this is a problem that people have already started running into. (When https://github.com/biocore/biom-format/pull/838 is resolved, we should be able to revert this change.)

mortonjt commented 4 years ago

Thanks! I'll take a look at this tonight. But I agree with the direction of this PR

On Mon, Feb 24, 2020, 4:34 PM Marcus Fedarko notifications@github.com wrote:

This isn't a good long-term solution, but will temporarily save people from running into the problem discussed in #117 https://github.com/biocore/songbird/issues/117 -- and this is a problem that people have already started running into. (When biocore/biom-format#838 https://github.com/biocore/biom-format/pull/838 is resolved, we should be able to revert this change.)

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https://github.com/biocore/songbird/pull/118 Commit Summary

  • DOC: pin pd vsn in standalone install instructions

File Changes

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mortonjt commented 4 years ago

Thanks @fedarko for looking into this!