biocore / songbird

Vanilla regression methods for microbiome differential abundance analysis
BSD 3-Clause "New" or "Revised" License
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Using a smaller default summary-interval #77

Closed fedarko closed 4 years ago

fedarko commented 4 years ago

I think lowering this to something in the 5 -- 30 range would be helpful, especially since the default parameters for running Songbird mean that most datasets (at least the ones I've tried) get processed pretty quickly.

(Sorry to inundate you with issues btw, I'm mostly just trying to log these here so I remember to address them soon)