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biocore / songbird

Vanilla regression methods for microbiome differential abundance analysis
BSD 3-Clause "New" or "Revised" License
54 stars 25 forks source link

add examples of how model fitting plots *should not* look? #84

Open fedarko opened 4 years ago

fedarko commented 4 years ago

Idea from Antonio.

mortonjt commented 4 years ago

That's a great idea! The easiest way to do this is to bump up the learning rate to 1 and see what those tensorboard plots look like.

@antgonza are you interested in contributing this to the readme?

antgonza commented 4 years ago

I can ... just looked at the output and it looks terrible, so good call. I also checked the 0.5 and the output also looks as bad. Any suggestion on a value that will make it border line?