TCGA abbreviation and cancer type were wrong.

biocore / tcga

Microbial analysis in TCGA data

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TCGA abbreviation and cancer type were wrong. #20

Closed yyoshiaki closed 4 years ago

yyoshiaki commented 4 years ago

In the browser http://cancermicrobiome.ucsd.edu/CancerMicrobiome_DataBrowser/,

TCGA Abbreviation	cancer type
TCGA-THCA	Thymoma
TCGA-THYM	Thyroid Carcinoma

is wrong. Correctly, it is

TCGA Abbreviation	cancer type
TCGA-THCA	Thyroid Carcinoma
TCGA-THYM	Thymoma

gregpoore commented 4 years ago

Hi @yyoshiaki, thanks a bunch for catching that! The table on the left-side of the browser that shows the abbreviation and meaning is distinct from the actual results (in R Shiny, it's actually loading a separate data frame), so the rest of the results displayed are still fine. I'll make this change soon and will close the issue then.

gregpoore commented 4 years ago

Website now fixed