Migrate NF modules to bioNextflow template - Githubissues

biocorecrg / BioNextflow

A collection of modules and sub-workflows for Nextflow

GNU General Public License v3.0

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Migrate NF modules to bioNextflow template #3

Open edgano opened 3 years ago

edgano commented 3 years ago

Here it can be found a list of modules I'm working to migrate to this project.

EDGAR Multiple Sequence Aligners

[x] Clustal Omega
[ ] MAFFT
[ ] FAMSA
[ ] T-Coffee Regressive

LUCA

[X] FASTQC
[X] Picard
[X] Samtools
[X] skewer
[X] cnvkit
[X] lumpy
[X] BWA
[x] Samblaster
[x] star
[X] MACS2
[X] MOAIMS
[ ] Epic2
[ ] MultiQC
[ ] bowtie
[ ] Salmon