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biocorecrg / ExOrthist

ExOrthist: a pipeline to extract exon orthologies at any evolutionary distance.
MIT License
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Error in my ExOrthist run #38

Open LudoCrg opened 1 year ago

LudoCrg commented 1 year ago

Hello,

I have been unable to complete my ExOrthist run because of the following error:

ERROR : Unknown image format/type: /nfs/users/lserrano/lciampi/JuanRamon/Orthologies/ExOrthist/singularity/biocorecrg-exon_intron_pipe-0.2.img ABORT : Retval = 255

I have been using nextflow version 20.04.1 (as recommended in the README) and singularity version 3.8.3, running the following command: NXF_VER=20.04.1 nextflow run main.nf -with-singularity

Could you please help me figure out what the problem is? Of course, let me know if you need any other information.

Thanks a lot in advance!

lucacozzuto commented 5 months ago

Hi, can you check the version of singularity is the same in the main node and in the cluster nodes? This seems like a mismatch between the versions. If you are using modules is better to put the load command in the .bashrc