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biocorecrg
/
master_of_pores
Nextflow pipeline for analysis of direct RNA Nanopore reads
https://biocorecrg.github.io/master_of_pores/
MIT License
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16
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Help with configuring the "global" config file to use resources in my cluster
#117
SabeenRaza75
opened
2 months ago
0
base calling error
#116
oohas2000
opened
1 year ago
0
Can't select genome instead of transcriptome
#115
melispyilmaz
opened
1 year ago
0
Discrepancy between coverage between Bam file and epinano/tombo site output?
#114
smk5g5
opened
1 year ago
0
Fail to install
#113
AndreaYCT
closed
1 year ago
0
NanoPreProcess is successfully running but it's not giving me a clear output?
#112
rober136
closed
2 years ago
1
The "nanopreprocess.nf" exits with an error, as the guppy_basecaller 6.0.1 outputs fastq files in subdirectories "pass" and "fail".
#111
sbridgett
closed
2 years ago
2
Newer guppy versions dont seem to have fast5_type.py
#110
xguse
closed
2 years ago
2
help interpreting why logBaseCalling might be failing
#109
xguse
closed
2 years ago
10
terraform: I have existing vpc/security group values that I want this instance to use
#108
xguse
closed
2 years ago
4
Copying ami-0bf3a9a6cb7a5ea9f to US-East Virginia?
#107
xguse
closed
2 years ago
3
Guppy_basecaller issue
#106
amol007-123
closed
2 years ago
1
Guppy
#105
amol007-123
closed
2 years ago
3
Error starting Nanopreprocess - >logbasecalling
#104
agamblindr
closed
2 years ago
4
Issue with NanoMod
#103
Maheen94
closed
2 years ago
3
Nanomod after Nanoporprocess_simple runs with no modules except "index_reference"
#102
AnunayS
closed
2 years ago
3
problem with NanoPreprocess
#101
MSajek
closed
2 years ago
2
V1.1
#100
lucacozzuto
closed
3 years ago
0
Revert "V1.1"
#99
lucacozzuto
closed
3 years ago
0
V1.1
#98
lucacozzuto
closed
3 years ago
0
Counts feature error during Nanopreprocess run
#97
Maheen94
closed
2 years ago
21
Error during NanoPreprocess step
#96
chad388
closed
2 years ago
1
Zero Division Error
#95
koushikmuralidharan
closed
3 years ago
9
unexpected BAM file is only 1KB with a successful run
#94
AhmedMohamed1993
closed
3 years ago
3
Could not install albacore
#93
manburst
closed
3 years ago
20
NanoCount: error: unrecognized arguments: NanoCount
#92
clsgithubusr
closed
3 years ago
3
How to install extra apt packages easily in biocorecrg-mopbasecall
#91
eylenth
closed
3 years ago
21
master of pores QC fail
#90
LubosBauer
closed
3 years ago
2
#QUESTION: to detect m6A RNA modifications
#89
hqs10
closed
2 years ago
3
NanoMod issues: Stops at index_reference
#88
hqs10
closed
3 years ago
7
Problems in starting the NanoPreprocess
#87
hqs10
closed
3 years ago
16
09chxj/
#86
almreis
closed
3 years ago
0
cxcccxc--pπP:?"…
#85
almreis
closed
3 years ago
0
Questions regarding to proper use
#84
vgori
closed
3 years ago
1
Update README.md
#83
enovoa
closed
3 years ago
0
NanoPreprocess error (error exit status 127)
#82
andrew-d-l-nelson
closed
3 years ago
11
run with PBS cluster error
#81
pl618
closed
3 years ago
4
Debian Med eager to complete Nanopore infrastructure
#80
smoe
closed
3 years ago
1
Nanopreprocess error
#79
carlshotwell
closed
3 years ago
4
join_results from NanoTail fails
#78
NuriaDiaz
closed
2 years ago
15
CUDA error in NanoPreprocess
#77
albertoriva
closed
3 years ago
6
problem with Nanomod
#76
yasukoh
closed
3 years ago
40
Problem with the Nanomod pipeline
#75
lionelus
closed
3 years ago
3
fastqc not found Nanopreprocess
#74
samir-watson
closed
3 years ago
9
NanoMod - Process getModificationsWithTombo
#73
ADelgadoT
closed
4 years ago
1
Awk command in basecalling process
#72
ADelgadoT
closed
2 years ago
3
guppy basecalling error
#71
yasukoh
closed
4 years ago
1
NanoMod after NanoPreprocessSimple
#70
yasukoh
closed
4 years ago
6
deeplexicon in NanoPreproessSimple
#69
yasukoh
closed
4 years ago
17
Record guppy version in module Nanopreprocess module
#68
ADelgadoT
closed
4 years ago
1
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