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biocswirl-dev-team / BiocSwirl

BiocSwirl is a series of in-depth swirlify generated courses used to teach bioinformatics workflows in R/Bioconductor using an interactive and easy to digest format. This project was the People's Choice Award for the Vancouver Bioinformatics Hackathon Hackseq2019.
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RNA-seq fastq download lesson #33

Closed neuroendokat closed 3 years ago

neuroendokat commented 3 years ago

Hello,

One of my students is trying to complete this lesson and when she enters "24" for the question about human cell lines in the sample, swirl unexpectedly exits. Any suggestions?

Thanks!

juliaphilipp commented 3 years ago

Hi Kat, thanks for bringing this to our attention!

I'm not quite sure what the reason for this is. I'll keep you posted. In the meantime, your student might want to try to start the course with a different user name, to start with a clean slate. This has helped me get through this question.

juliaphilipp commented 3 years ago

Hi Kat, sorry for the delay. This issue should be resolved. However, for the fix to be effective you'll have to update (uninstall and re-install the RNAseq course). Code for that below:

library(BiocSwirl)
uninstall_course('RNAseq')
load_course('RNAseq')

after that, you should be able to start the course like you're used to. unfortunately, your progress will be lost.

Let us know if the problem persists.