Clean up error message for sambamba-sort: couldn't parse (Allow memory command line option to be case independent.)

biod / sambamba

Tools for working with SAM/BAM data

http://thebird.nl/blog/D_Dragon.html

GNU General Public License v2.0

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Clean up error message for sambamba-sort: couldn't parse (Allow memory command line option to be case independent.) #339

Closed AMChalkie closed 6 years ago

AMChalkie commented 6 years ago

Great software, minor comment:

Allow memory command line option to be case independent. More useful error message "couldn't parse command line option: 28g"

sambamba sort -t 32 -m 28g -o Aligned.out.srt.bam Aligned.out.bam sambamba-sort: couldn't parse sambamba sort -t 32 -m 28G -o Aligned.out.srt.bam Aligned.out.bam this works fine.

pjotrp commented 6 years ago

Noted.