Add a new sorting option to pull together mates when sorting by read name

biod / sambamba

Tools for working with SAM/BAM data

http://thebird.nl/blog/D_Dragon.html

GNU General Public License v2.0

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Closed emi80 closed 5 years ago

emi80 commented 5 years ago

It works with both lexical and natural (as in Samtools) order

pjotrp commented 5 years ago

@emi80 I synchronized sambamba master with the latest BioD. Please pull and update submodules. Dropped direct dependency on undeaD.