Hi,
you provided an example using pattern matching for the "read_name" field (see below). is there support for negative (inverse) pattern matching? e.g. using the example below, what would be the syntax if I want all the reads that do not match /^ERR/ in "read_name" ?
Hi, you provided an example using pattern matching for the "read_name" field (see below). is there support for negative (inverse) pattern matching? e.g. using the example below, what would be the syntax if I want all the reads that do not match /^ERR/ in "read_name" ?
sambamba view -F "read_name =~ /^ERR/" HG01375.mapped.ILLUMINA.bwa.CLM.low_coverage.20120522_chr1.bam