biod / sambamba

Tools for working with SAM/BAM data
http://thebird.nl/blog/D_Dragon.html
GNU General Public License v2.0
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sambamba markdup stuck in the finding positions of the duplicate reads in the file... #519

Open xiechangxiao opened 3 months ago

xiechangxiao commented 3 months ago

The sambamba markdup stuck when I was using 20 threads, but it worked when I was using 10 threads. cmd: sambamba markdup -t 20 -l 6 -p --tmpdir=./tmp sort.bam out.bam 360截图20240711132310074 @lomereiter