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biodavidjm / artMS

Analytical R Tools for Mass Spectrometry
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Fraction of imputed values is zero in results.imputation.pdf #104

Open daniswan opened 5 years ago

daniswan commented 5 years ago

results.imputation.pdf output file from AnalysisQuantifications functions. In image, the percentage/fraction of imputed values is shown as zero, when clearly it is not zero.

image

biodavidjm commented 5 years ago

Are you talking about the 0.00 / 1.00 on top of the chart? if so, that it is indicating the scale (from 0 to 1). That's why every quarter is 0.25, 0.50, 0.75... 1. Makes sense?

daniswan commented 5 years ago

Yes. But from the look of it maybe 8% of data was imputes, so it should be 0.08/1.00 or something like that? Or do I not understand?

On Wed, May 8, 2019 at 8:57 PM David JM notifications@github.com wrote:

Are you talking about the 0.00 / 1.00 on top of the chart? if so, that it is indicating the scale (from 0 to 1). That's why every quarter is 0.25, 0.50, 0.75... 1. Makes sense?

— You are receiving this because you authored the thread. Reply to this email directly, view it on GitHub https://github.com/biodavidjm/artMS/issues/104#issuecomment-490734126, or mute the thread https://github.com/notifications/unsubscribe-auth/AE5CEAV7CZINUQCFJ6HGCRLPUOOJRANCNFSM4HLVL4JQ .

biodavidjm commented 5 years ago

Well, just by using the reference axis, the proportion of imputed values should be a little bit less than 0.0625 (>6%). Can you check if that is the actual percentage of imputed values? I'll try to add the legend with the actual values.