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biodavidjm / artMS

Analytical R Tools for Mass Spectrometry
GNU General Public License v3.0
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Address Warning messages #126

Closed biodavidjm closed 4 years ago

biodavidjm commented 5 years ago 
"Warning messages:
1: In data.table::dcast(data = b, Feature + Proteins ~ BioReplicate,  :
  The dcast generic in data.table has been passed a data.frame and will attempt to redirect to the reshape2::dcast; please note that reshape2 is deprecated, and this redirection is now deprecated as well. Please do this redirection yourself like reshape2::dcast(b). In the next version, this warning will become an error.
2: Removed 6715 rows containing non-finite values (stat_density2d).
3: Removed 6715 rows containing non-finite values (stat_smooth).
4: In data.table::dcast(data = b, Feature + Proteins ~ BioReplicate,  :
  The dcast generic in data.table has been passed a data.frame and will attempt to redirect to the reshape2::dcast; please note that reshape2 is deprecated, and this redirection is now deprecated as well. Please do this redirection yourself like reshape2::dcast(b). In the next version, this warning will become an error.
5: Removed 5550 rows containing non-finite values (stat_density2d).
6: Removed 5550 rows containing non-finite values (stat_smooth).
7: In data.table::dcast(data = biorepliaggregated, Proteins + Feature ~  :
  The dcast generic in data.table has been passed a data.frame and will attempt to redirect to the reshape2::dcast; please note that reshape2 is deprecated, and this redirection is now deprecated as well. Please do this redirection yourself like reshape2::dcast(biorepliaggregated). In the next version, this warning will become an error.
8: In data.table::dcast(data = biorepliaggregated, Proteins + Feature ~  :
  The dcast generic in data.table has been passed a data.frame and will attempt to redirect to the reshape2::dcast; please note that reshape2 is deprecated, and this redirection is now deprecated as well. Please do this redirection yourself like reshape2::dcast(biorepliaggregated). In the next version, this warning will become an error."