artmsEvidenceToSaintExpress: MISSING LENGTHS WITH THE MEDIAN LENGTH FROM THE DATASET

biodavidjm / artMS

Analytical R Tools for Mass Spectrometry

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artmsEvidenceToSaintExpress: MISSING LENGTHS WITH THE MEDIAN LENGTH FROM THE DATASET #173

Open Skourtis opened 3 years ago

Skourtis commented 3 years ago

Hi,

I'm directly inputting the evidence file from MaxQuant to artmsEvidenceToSaintExpress and I'm getting this warning which makes me think that my evidence file should have protein-length information for SAINTS express to use. Here is a snapshot of my evidence file.

evidence_subsetted.xlsx

biodavidjm commented 3 years ago

Hi @Skourtis . Would you mind providing the error output that you get when running the artms function? Thanks!