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biodiverse
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ubms
Fit models to data from unmarked animals using Stan. Uses a similar interface to the R package 'unmarked', while providing the advantages of Bayesian inference and allowing estimation of random effects.
https://hmecology.github.io/ubms/
GNU General Public License v3.0
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Switch CI from Travis to Github Actions
#32
kenkellner
closed
3 years ago
1
Add vignette comparing JAGS and ubms
#31
kenkellner
closed
3 years ago
0
Add configuration for generating pkgdown site
#30
kenkellner
closed
3 years ago
0
Refactor getP into a single function
#29
kenkellner
closed
3 years ago
0
Add LICENSE
#28
kenkellner
closed
3 years ago
0
Add stan_occuTTD function
#27
kenkellner
closed
3 years ago
0
Add pre-built random effects vignette
#26
kenkellner
closed
3 years ago
0
Make ranef and coef work more like lme4 ranef
#25
kenkellner
closed
3 years ago
1
stan_distsamp tests
#24
kenkellner
closed
4 years ago
0
stan_occuRN tests
#23
kenkellner
closed
4 years ago
0
Speed up tests on Travis by running long tests locally only
#22
kenkellner
closed
4 years ago
0
Speed up fitting function tests
#21
kenkellner
closed
4 years ago
0
Colext tests
#20
kenkellner
closed
4 years ago
0
Add tests for stan_multinomPois and fix related bugs
#19
kenkellner
closed
4 years ago
0
Add tests for stan_occu and stan_pcount
#18
kenkellner
closed
4 years ago
0
Refactor gof and add support to stan_multinomPois and stan_distsamp
#17
kenkellner
closed
4 years ago
0
Add examples to all fitting functions
#16
kenkellner
closed
4 years ago
1
Add goodness-of-fit tests for stan_distsamp and stan_multinomPois
#15
kenkellner
closed
4 years ago
0
Add overview vignette
#14
kenkellner
closed
4 years ago
0
Add vignette showing use of random effects
#13
kenkellner
closed
3 years ago
0
Add hazard-rate key function option to stan_distsamp
#12
kenkellner
closed
4 years ago
0
Merge distsamp into single_season model
#11
kenkellner
closed
4 years ago
1
coef method broken
#10
kenkellner
closed
4 years ago
1
Add hazard key function to stan_distsamp
#9
kenkellner
closed
4 years ago
0
Test suites for ubmsFit methods
#8
kenkellner
closed
4 years ago
1
Merge distsamp function into single_season Stan model
#7
kenkellner
closed
4 years ago
0
Add examples to all fitting function help files
#6
kenkellner
closed
4 years ago
0
Add overview vignette
#5
kenkellner
closed
4 years ago
0
Add stan_occuTTD fitting function
#4
kenkellner
closed
3 years ago
1
Test suites for all fitting functions
#3
kenkellner
closed
4 years ago
0
Consolidate Stan models
#2
kenkellner
closed
4 years ago
1
SD in predict() is NA if models are run with save_warmup = FALSE (issue in nsamples)
#1
jniedballa
closed
4 years ago
5
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